Transcript Information: R_Transcript_341750.p1


Annotated TAIR IDAT5G48930.1
Annotated Gene Namehydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
Annotated Gene Symbol(s)HCT
Annotation TypeHomolog
Chromosome Positionchr5:19836654-19838092 | Reverse length=433
E-Value7E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22911666470358
Replicate 20.52710377614137
Replicate 30.28753227108141
Condition 2: 8 Hour
Replicate 10.5122565888545
Replicate 20.18712035013544
Replicate 30.30379264636631
Condition 3: 24 Hour
Replicate 10.19211554165443
Replicate 20.27684425385662
Replicate 30.82422318904634


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_341750.p1 GENE.R_Transcript_341750~~R_Transcript_341750.p1 ORF type:complete len:239 (+),score=33.86,Transferase|PF02458.11|1.9e-49 R_Transcript_341750:108-824(+)
ATGAAAGTGGTGAAGCAAACAAGAATGGTGAGGCCAAGTGAGGAGACCCCAAGGCACCGTCTTTGGCTATCAAGCCTAGACTTGTTTTCTAGCATTCCCAATACACACAGTCCGCTTGTGCTCTTCTTTCGTTGTCCAAATAGTCATGGTCAAAATCCTTTCAGTGCTGAAATTATGAAGGAAGCTTTGAGCAGAGCTCTGGTTCCATTCTATCCTTTGGCAGGAAGGTTAAATAGAAATCATGACAAAAATGGCAGGCTAGAGATCGATTGCAATGGGGAAGGGATCTTTTTTATCGAGGCCACGACTTCACAATTCACGCTTTCCGATTTTGAGAAGGATGAGTTTAGGCCCAGTGAAGAGCTATACGAGCTTGTAATCCCCAAATGGGATTATTCGGGTAGTAATTGGAATGAGATGATCTCAAACTTGCCATTTTTGTTAATACAAATGACCCAATTTAGCTGTGGTGGTGTAGCACTTGGAATTGCCTTACAACACCAAATAGGAGATGCTGCTGCCATTGTTTACTTCATTGAATCATGGTCTAGACTTGCTAGGGGACTTGGTCTTGCTTTTCCTCCCGTCTTTGATCGGGTTTCCTACTTTGCTCCTCGGAATCCTCGCAGAGTTGAGTTCTACCACTTGGAGTACCAAGATCCACCTTTGCCCCTCCCTGTCCCCGGAATCCGCCAGACAGTGCTGATAACGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_341750.p1 GENE.R_Transcript_341750~~R_Transcript_341750.p1 ORF type:complete len:239 (+),score=33.86,Transferase|PF02458.11|1.9e-49 R_Transcript_341750:108-824(+)
MKVVKQTRMVRPSEETPRHRLWLSSLDLFSSIPNTHSPLVLFFRCPNSHGQNPFSAEIMKEALSRALVPFYPLAGRLNRNHDKNGRLEIDCNGEGIFFIEATTSQFTLSDFEKDEFRPSEELYELVIPKWDYSGSNWNEMISNLPFLLIQMTQFSCGGVALGIALQHQIGDAAAIVYFIESWSRLARGLGLAFPPVFDRVSYFAPRNPRRVEFYHLEYQDPPLPLPVPGIRQTVLITV*

Click here to download the sequence:
Link to NCBI Protein BLAST