Transcript Information: R_Transcript_341845.p1


Annotated TAIR IDAT1G53470.1
Annotated Gene Namemechanosensitive channel of small conductance-like 4
Annotated Gene Symbol(s)MSL4
Annotation TypeHomolog
Chromosome Positionchr1:19958587-19961578 | Forward length=881
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20394369781809
Replicate 20.029324441922204
Replicate 30.15996325136978
Condition 2: 8 Hour
Replicate 10.1709906770059
Replicate 20.093690845703292
Replicate 30.2028112918479
Condition 3: 24 Hour
Replicate 10.032063976575006
Replicate 20.061606868409434
Replicate 30.24455535963014


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_341845.p1 GENE.R_Transcript_341845~~R_Transcript_341845.p1 ORF type:5prime_partial len:716 (+),score=42.87,MS_channel|PF00924.14|1.1e+04,MS_channel|PF00924.14|1.6e-07 R_Transcript_341845:1-2148(+)
CATATCAGCAAAATCACCAAAACGATACAATTAACCGTACTCCCTGTATCTTTTCTAATCGTTTTGGCAGCGGTTGTAATTGCCAGCAACATAGCGCTACCATTACTACTAGTCTCTATCTTAATAGTGCGATTACTCCAATTCTTTGCACAAGATGTGTACTATGTAATTGCTGCATTCTATAAGAGAGTCCTTTTTACTTACATGAGTGTAGCCCTGGGACTAATTCTATTAGAAATGGGTCTAATCTATCCACTAGCTAAATATGTTCCTTTTTTGAAAAAAATGATGATAATTGGACTACCTATAACAAAATTGATTAAGATATCTTGTGCACTTTGTGGGTTTTACATTCTCAAGTGCATCATTTGCTTTATATCATGGAAATATTTCGCTGCACACGGCGTGTCAATGGAACAAGATGGATCAATCATGGAGATTCATGACACAATCTCCGAGGGAGTGAGTTGTGTCTTCCTTTGGTGGGCGGAATTAGTGGTAGAAACAAATTTCCCTTCTTATGAGGGCTCTAAGATTAGTCCTGGATTGGAAACTCACGCGTTAATAGAGGTGCTCATCTTTATCGCAATAGGATACAATATTATCCGAGTTTCTACTTATGCAACTGTGTGGGTGTTATGGAAGTATCGTAGTAAAAGCCAAGCAGAGGATGATTCAGATGAAGGGACAGTGGAAAACATTTGGTCGAAAACTAGCAAGTATTTGGTGTTTTGTGCATTCGGATTAAGGAGGAGTTTCAACTTTCTATTTAGCTCCGCTATGCTTGCACTTACATGGGAATTGTACTTCCGTTCACATATTCCAGAAGAAGAAGCCAAAAGGATTATGGATTTTGGTGCTTGGACTGGTTTTAGTCTTTTCATTTGTTCGGTTCTTTGGTTGATTAAGAATGGGATATTGCTCTCCTGGGAAGCTCAACAAGTGTACTTAAGATTAGAGAGTGATATCTTAAATTTGGGACAAGAATTGTACTTTCTTGGTATACTTGGTTGTCACAAGCATGATATTTTTCGTCTAGGGAATCGAAGGGGTCGAAAGAAGGTAAACACAATCAGAGAATGCTTCTTAGCAAGGTCATGGTTCTTAGCAAGGTCACTCATGGATAAGGATTCTGGTAGCAGGAGAAGCTATAGTTTGTATGAGTTACATCAAGTCGCTCAATACTTTCTCAAATCAAAGGATGCTTTATCAAAAGACATTTTTATCGTTGACCTCCTTGACCACCTTAAAACCAATCTTCGGAGTGGAGAAATAGACGATAAAATATTGAAGGAATTTATCGATGAGATGCTGAACTATGGACCTACAAGAAGAGGAAGGAAAAATACAAGTGAAGAGTCTCCTGGTGATAAAAAAACAGACTTAAATGACTGGAGAATTTTTAAAAACTTGGTGATCAAAAATCGATCCAAGGATCAAATGTCGGATTTTAAAATAACACTTGAAGATATTCAAGCATGGGCGGAAAAGGCAAGGAAGAACTGTTTGTTCCTCGCAAATACTCTAAGTAGCGCCATAGAATTGGTGGAGTGCCTAAACACTCTTTTGAGTGCTATTCTACTAGCCATAGCACTTTTATTGTGGCTAATTCTCACTAAATTAGCTACTATTAAAGTTCTGAGTGTCATCTTAGTACAACAAGTGGCGATTACTTTTATCTACAAAGATACTCTTGTACGTATTTTTGACGGGATCATGTTTATGTATGCGATTCGACCCTTTACCGTTGGTGATTTGTGTAGCATTGATGATATGATGTTGGAGGTCAAAGCAATTGATATTTGGAAAACAACCTTCTTAAAAGTAGAAAATGAAGCAGAAGTGATATATCAAATTCCACAGTTGAACAAAACAAAAATCATCAATTACAAAGGTGAATTTGATCGTTGTGATTGTTTAGAATTCGATGCATCATCTTTGAGTGAAGAAAAGATCAAGAAGCTTGAAGCCGAAATCAAACAGCATATAGAGAAAAGTTGTGAAGATTGTAACCCATTAGAGTCAAGTGTAGCAGTGATAGGAAAAGGAGACAAGGTTAACGTGGTTGTTCGTTTGAAGTACAATTTCCAATGTCGAGATTCCACACCATCAGCCTATCTCAAGCGCAAGGAGGGATTGCAATCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_341845.p1 GENE.R_Transcript_341845~~R_Transcript_341845.p1 ORF type:5prime_partial len:716 (+),score=42.87,MS_channel|PF00924.14|1.1e+04,MS_channel|PF00924.14|1.6e-07 R_Transcript_341845:1-2148(+)
HISKITKTIQLTVLPVSFLIVLAAVVIASNIALPLLLVSILIVRLLQFFAQDVYYVIAAFYKRVLFTYMSVALGLILLEMGLIYPLAKYVPFLKKMMIIGLPITKLIKISCALCGFYILKCIICFISWKYFAAHGVSMEQDGSIMEIHDTISEGVSCVFLWWAELVVETNFPSYEGSKISPGLETHALIEVLIFIAIGYNIIRVSTYATVWVLWKYRSKSQAEDDSDEGTVENIWSKTSKYLVFCAFGLRRSFNFLFSSAMLALTWELYFRSHIPEEEAKRIMDFGAWTGFSLFICSVLWLIKNGILLSWEAQQVYLRLESDILNLGQELYFLGILGCHKHDIFRLGNRRGRKKVNTIRECFLARSWFLARSLMDKDSGSRRSYSLYELHQVAQYFLKSKDALSKDIFIVDLLDHLKTNLRSGEIDDKILKEFIDEMLNYGPTRRGRKNTSEESPGDKKTDLNDWRIFKNLVIKNRSKDQMSDFKITLEDIQAWAEKARKNCLFLANTLSSAIELVECLNTLLSAILLAIALLLWLILTKLATIKVLSVILVQQVAITFIYKDTLVRIFDGIMFMYAIRPFTVGDLCSIDDMMLEVKAIDIWKTTFLKVENEAEVIYQIPQLNKTKIINYKGEFDRCDCLEFDASSLSEEKIKKLEAEIKQHIEKSCEDCNPLESSVAVIGKGDKVNVVVRLKYNFQCRDSTPSAYLKRKEGLQS*

Click here to download the sequence:
Link to NCBI Protein BLAST