Transcript Information: R_Transcript_341846.p1


Annotated TAIR IDAT3G14810.1
Annotated Gene Namemechanosensitive channel of small conductance-like 5
Annotated Gene Symbol(s)MSL5
Annotation TypeHomolog
Chromosome Positionchr3:4971223-4974216 | Reverse length=881
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.93008718240605
Replicate 20.53493759022415
Replicate 30
Condition 2: 8 Hour
Replicate 10.15596092323086
Replicate 20.85455599393066
Replicate 30.34684606280994
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.41823639529103


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_341846.p1 GENE.R_Transcript_341846~~R_Transcript_341846.p1 ORF type:5prime_partial len:157 (+),score=26.69 R_Transcript_341846:3-473(+)
TTAGTACAGCAAGTGGCGATTACTTTTATTGAGGGGATCTTGTTTATGTATGCAATTCGACCCTTCAACGTTGGTGATTTATGTCACATTGATGATATGATGTTGGAGGTCAAAGCAATTGATATTTGGAAAACAACCTTCTTAAAAGTAGAAAATGAAGCAGAAGTGATATATCAAATTCCACAGTTGAACAAAACAAAAATCATCAATTACAAAGGTGAATTTGATCGTTGTGATTGTTTAGAATTCGATGCATCATCTTTGAGTGAAGAAAAGATCAAGAAGCTTGAAGCCGAAATCAAACAGCATATAGAGAAAAGTTGTGAAGATTGTAACCCATTAGAGTCAAGTGTAGCAGTGATAGGAAAAGGAGACAAGGTTAACGTGGTTGTTCGTTTGAAGTACAATTTCCAATGTCGAGATTCCACACCATCAGCCTATCTCAAGCGCAAGGAGGGATTGCAATCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_341846.p1 GENE.R_Transcript_341846~~R_Transcript_341846.p1 ORF type:5prime_partial len:157 (+),score=26.69 R_Transcript_341846:3-473(+)
LVQQVAITFIEGILFMYAIRPFNVGDLCHIDDMMLEVKAIDIWKTTFLKVENEAEVIYQIPQLNKTKIINYKGEFDRCDCLEFDASSLSEEKIKKLEAEIKQHIEKSCEDCNPLESSVAVIGKGDKVNVVVRLKYNFQCRDSTPSAYLKRKEGLQS*

Click here to download the sequence:
Link to NCBI Protein BLAST