Transcript Information: R_Transcript_342051.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value3E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2880746973209
Replicate 20.79504063538478
Replicate 31.0645127626439
Condition 2: 8 Hour
Replicate 10.4214434586445
Replicate 20.59654676168395
Replicate 30.76542936351029
Condition 3: 24 Hour
Replicate 10.59271447231594
Replicate 20.32266729874339
Replicate 30.97948420285599


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_342051.p1 GENE.R_Transcript_342051~~R_Transcript_342051.p1 ORF type:complete len:1162 (+),score=140.82,RVT_1|PF00078.23|3e-41,zf-RVT|PF13966.2|2.6e-17,RVT_3|PF13456.2|1e-15,RVT_3|PF13456.2|3.5e+03 R_Transcript_342051:264-3749(+)
ATGTGGCGCATTAGGTTTGATGAAGCTGCAGTGCGACACCTCTCTGCCCTCAACTCGGACCATTGCCCCTTACTGATTAGCACTACAGGGTTTGCTAGATTAACTTCTAGCCCGAAGCCTTTCCGGTTCTTAGCCTCTTGGATGTCACACGATCAATTCGACACCTTTGTCAGAAGCGTCTGGAGGAATGACAAGCCTATAGTGCCCTTCCTTAAGGACTTTGCCTCCCAGCTTCAAGACTGGAATCAGAATGTATTTGGAAATATTTATAGGAAGAAGAAAATATTGTGGGCAAGATTGTCTGGCATTCAGCGCTGCCTTGCAGAAAGTGGGAACCGGTACCTGTTTAAAAAAGAAGCACAACTTAGACGAGAATTGGATGAAGTTCTTGATCAAGAGGCGACTCTCTGGTACCAGAAATCTAGACAAGAGGCGATTCGGGATGGGGATCGCAATACTACCTTCTTCCACACTTTAACCATCATTCGAAGAAGGAGGAATAGAGTGGAGGCACTTCGCAACAACACTAATGAGTGGATCACCAACTCGGGGGAACTTAAAACCATGATGCTGAATTACTTCCAGGGTCTTTATTGTGAACAAGGGGGGTCTAAGGAGGGCGAACTCCCCTCTGACTTCTTTCCTCCACTCACGGCAGGTATGTGTGAGAAACTGAACAGGCCATTCACAGTGTCTGATATTCGTGCAGTGGTGGAATCCATGCATCCCTACAAAGCGCCTGGTCCAGATGGATTCCAAGCAATATTCTTCCAAAAAAAATGGGATGTGGTGGGCGAAAGTTTATGTGATACAGTGCTCAGAGTGCTGCAAGGCAAAATTTTCCCTGAGGGGCTCAATGAGACCTTTGTAGTTTTAATACCAAAAGTGGATACTCCGGAACGAGTCTCGCAATTCCGTCCGATAAGCCTATGTAACGTAGTCTACAAAGTCATCACGAAAGCCATTGTGAACAGACTCAAGCCATTGCTCCCCCACATGATATCCCCTACTCAAGGGGCCTTTGTCCCAGGACGGCAGATTACTGATAATATCATCATTGTGCAAGAAGCTATTCACACCATGAGACGTAAGAAGGGTGCTACGGGTTTTATGGCAATCAAGATAGACCTTGAAAAGGCCTACGACAGATTGCGCTGGGAGTTTATTAAGGATACGCTCCAAGAAATGCAAATTCCAATCCTCCTCCGGGAAGTGATAATGCTTTGTGTCACAACACCTACCATGCGGATATTGTGGAATGGGGACCCGATGGAAGATTTCCGACCTTCTCGAGGTATTCGCCAAGGTGACCCCCTTTCCCCGTACATATTTGTTATGTGTATGGAACGCTTAGCTCATATCATTGAAGAGGCAGTAGGTGCAAAGTCGTGGAAACCAATTGAATGTAGCAGAGGGGGCCCTAAACTCTCAAATATTTTCTTTGCGGATGACGTGGTTCTCTTTGCCGAAGCATCATTGGAACAGGCACAGGTTGTGAGGAAGTGCCTTGATAGGTTTTGTCAAGCTTCTGGAGAGTTGGTTTCTTTTACAAAATCAAGAGTTTTCTTCTCCACCAACGTGGACGAGCTACAGGGTGCAAGAATAAGTGAGTGCCTACAAATAGAGTCTACGAATGACTTGGGCTTTTATCTCGGGATGCCGACTATCCATGGACGCATTACTAAGGCAACCTATAGCCACATACTTGACAAGATGAATACTAAGTTGCAAGGATGGAAGTCTAAGTGCTTGTCCCTTGCAGGGAGAATTACACTTACTAAATCGGTGTTATCCTCCTTGTCTTACTACTCAATGCAAACTGCTAAGATTCCCCGACTCTTCTTGTGGGGAGGCTCCAATGAGGAACGAAAAGTTCATCTTGTGTCATGGGAGAATGTACAAAAGGATAGAAAGGATGGAGGACTAGGCATAAGATCGATGAGACAAGTGAACGCGGCGTTCCTAACCAAGCTTGGATGGAGAGCATTGTCGGAACCACACTCCTTATGGTCTCAGGTCCTAAGGGCAAAGTATTGTAGGGGACGATGTGACTTGGACATGTTTGTGGTCAAGGACTCGTCGTCTCATGCTTGGAAAGGCATTTGCAAGAATGCGACAGTTATTCAAAAAGGGGCTCGCGTTAATCTCGGAAACGGAAAGACAACTCTGTTTTGGGATCACTGTTGGGCAAGTGAGAAGCCACTCTCATCCTTCGCTCTAAGGGAAATACCGCTTGAGGAGCAAGATCGGACGGTGGAGGAGTACTGGTCTTCACAAGGAGATTGGATGTGGGACCAATTCTCTGATTTATTTCCTGAAGAGGTGCTAAAAACTATTGCCACCCACTCTCTTATCCCAGGGGACGAGGAGATGGACGCGCTCTATTGGGGAGGAACCTCTTCAGGTCAGTTCTCCATAAATTCTGCCCTCAAAATTATCAAGGGTGAGGAACATGAAGGTCGTGATACTTGGTGGAAGCTGGCTTGGCAAATTCCTGTGTCTCGAAGAGTTCGTGTTTTTATGTGGCTTGTCTTGCAAGACCGCATACTTTCTAATGCCAACAGAGTTAGGCGACAATTAAGTGATGACCCAAGATGCACCTCTTGTGGAGCAAGTGAAGAAACCACGTTGCATATCCTCCGAGATTGCCCCCATGCGCTAGCCTTATGGCGGAATCGAGGATATAGTACATCAAGCTCCATGTTCTCCAACCCATCACTTAAACATTGGGTGGTGGACCAGTTACAGAACCCCTCCAACTCAAGCCTTAGTGAAGGGGCGATGAAGTTCTCAGTAACCCTCTGGTGGATCTGGAAATGGCGGAATTGTAGGATTTTTGGAAAGGAAAATGAAATCCCTTTATACCAAGCAGGCTTCCTAGCTCGCCGGTTTGAAGAAATGAAGAATGCCATGCAACGGGATGACCTCCTGTTCCGAAATAATCGAATCATAACTAGAGAAGCCTTAATTCAATGGAAACCACCACCTGAGGGATGGCTCATGTTGAACACTGATGGAGCTTCTAAGGGAAACCCAGGTGTCTCGGGAGGGGGAGGTTTAATAAGGGACTCAACAGGCAAGATGGTGGTGGGATTCGGAGCTGCGTATGGTATTTGTACTGTTACTCGAGCAGAATTGATGGCGGTTTGGCAAGGGCTGCAAATGGCAAGGGCAAGGGGAATTACTAAGCTCCTGGTTTGTTTGGACTCGGCAGTTGTGGTAAGAATGCTAAATCAAGAAGGTGGCAACCCTGCCATGTTTCATTACGCGAAGAAAAAATGCAAACAGTTGATGGGAGATCCTGGATGGCGCGTCAAAGTGGAGCACTGTTTTAGAGAAGCCAACAGAGCGGCTGATTGGTTGGCAAATGCGGGCATTGAGTGGGGGGTACGGCGGCAGGAAGTGGAAACCCCACACCATGATCTTGCAAGAATCATTTCTGAGGAGGCGCGGGGAGTTTCGTGGCCGAGGATGGTGACTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_342051.p1 GENE.R_Transcript_342051~~R_Transcript_342051.p1 ORF type:complete len:1162 (+),score=140.82,RVT_1|PF00078.23|3e-41,zf-RVT|PF13966.2|2.6e-17,RVT_3|PF13456.2|1e-15,RVT_3|PF13456.2|3.5e+03 R_Transcript_342051:264-3749(+)
MWRIRFDEAAVRHLSALNSDHCPLLISTTGFARLTSSPKPFRFLASWMSHDQFDTFVRSVWRNDKPIVPFLKDFASQLQDWNQNVFGNIYRKKKILWARLSGIQRCLAESGNRYLFKKEAQLRRELDEVLDQEATLWYQKSRQEAIRDGDRNTTFFHTLTIIRRRRNRVEALRNNTNEWITNSGELKTMMLNYFQGLYCEQGGSKEGELPSDFFPPLTAGMCEKLNRPFTVSDIRAVVESMHPYKAPGPDGFQAIFFQKKWDVVGESLCDTVLRVLQGKIFPEGLNETFVVLIPKVDTPERVSQFRPISLCNVVYKVITKAIVNRLKPLLPHMISPTQGAFVPGRQITDNIIIVQEAIHTMRRKKGATGFMAIKIDLEKAYDRLRWEFIKDTLQEMQIPILLREVIMLCVTTPTMRILWNGDPMEDFRPSRGIRQGDPLSPYIFVMCMERLAHIIEEAVGAKSWKPIECSRGGPKLSNIFFADDVVLFAEASLEQAQVVRKCLDRFCQASGELVSFTKSRVFFSTNVDELQGARISECLQIESTNDLGFYLGMPTIHGRITKATYSHILDKMNTKLQGWKSKCLSLAGRITLTKSVLSSLSYYSMQTAKIPRLFLWGGSNEERKVHLVSWENVQKDRKDGGLGIRSMRQVNAAFLTKLGWRALSEPHSLWSQVLRAKYCRGRCDLDMFVVKDSSSHAWKGICKNATVIQKGARVNLGNGKTTLFWDHCWASEKPLSSFALREIPLEEQDRTVEEYWSSQGDWMWDQFSDLFPEEVLKTIATHSLIPGDEEMDALYWGGTSSGQFSINSALKIIKGEEHEGRDTWWKLAWQIPVSRRVRVFMWLVLQDRILSNANRVRRQLSDDPRCTSCGASEETTLHILRDCPHALALWRNRGYSTSSSMFSNPSLKHWVVDQLQNPSNSSLSEGAMKFSVTLWWIWKWRNCRIFGKENEIPLYQAGFLARRFEEMKNAMQRDDLLFRNNRIITREALIQWKPPPEGWLMLNTDGASKGNPGVSGGGGLIRDSTGKMVVGFGAAYGICTVTRAELMAVWQGLQMARARGITKLLVCLDSAVVVRMLNQEGGNPAMFHYAKKKCKQLMGDPGWRVKVEHCFREANRAADWLANAGIEWGVRRQEVETPHHDLARIISEEARGVSWPRMVTS*

Click here to download the sequence:
Link to NCBI Protein BLAST