Transcript Information: R_Transcript_342064.p1


Annotated TAIR IDAT1G60900.1
Annotated Gene NameU2 snRNP auxilliary factor, large subunit, splicing factor
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22424008-22427806 | Forward length=589
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8252960954719
Replicate 20.78736126561118
Replicate 33.7223448593748
Condition 2: 8 Hour
Replicate 11.2242932473623
Replicate 22.7951102301482
Replicate 31.8151610620387
Condition 3: 24 Hour
Replicate 12.2957807227704
Replicate 21.3784536806611
Replicate 33.2831557030346


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_342064.p1 GENE.R_Transcript_342064~~R_Transcript_342064.p1 ORF type:5prime_partial len:80 (+),score=13.90 R_Transcript_342064:3-242(+)
GATAAGGAGGGGAGTAAGGCTCGAGAGCCAAAAAGTGATATAGACTTGGATATTGAATGGGATAGGGAAAGAAGGGACAAATATCATGGTCGAAGTAGGGATAAGGACTCTGATAGAGATCAAAATGATACAGGGCCTCATATCAGAGATAAAAAGATTGAAAGGGATACTAAACTATGGGACGATGATACATGGATAAGGAAAACGACAAGAATAATGTCTGAGATAAATATAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_342064.p1 GENE.R_Transcript_342064~~R_Transcript_342064.p1 ORF type:5prime_partial len:80 (+),score=13.90 R_Transcript_342064:3-242(+)
DKEGSKAREPKSDIDLDIEWDRERRDKYHGRSRDKDSDRDQNDTGPHIRDKKIERDTKLWDDDTWIRKTTRIMSEINIK*

Click here to download the sequence:
Link to NCBI Protein BLAST