Transcript Information: R_Transcript_342098.p1


Annotated TAIR IDAT1G72370.1
Annotated Gene Name40s ribosomal protein SA
Annotated Gene Symbol(s)P40, AP40, RP40, RPSAA
Annotation TypeHomolog
Chromosome Positionchr1:27243148-27244842 | Reverse length=298
E-Value1E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.43291341064532
Replicate 30.23615193398095
Condition 2: 8 Hour
Replicate 10.88351059087998
Replicate 20.11526227753188
Replicate 30.18713000639574
Condition 3: 24 Hour
Replicate 10.23667842502788
Replicate 20.11368690149782
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_342098.p1 GENE.R_Transcript_342098~~R_Transcript_342098.p1 ORF type:5prime_partial len:194 (+),score=35.15,Ribosomal_S2|PF00318.16|7e-06,Ribosomal_S2|PF00318.16|5.7e-16,Ribosomal_S2|PF00318.16|3.6e+03 R_Transcript_342098:3-584(+)
AAGATCAAGCTCGCTGCCAGAGTCATCGCCGCTGTCGACAATCCACAAGAAGTCATTGTCGTCTGCGCCAGACCCTACGGTCAAAGAGCTGTTATCAAGTACGCTAGATACACTGGTGCCACCGCCACCTCTTCCAGCAGATGGACTCCCGGTACTCTTACCAATCAAAACACCATCCAGTTCAAGGAACCTAAGCTCTTGATCGTTGTTGACCCCAAGAGTGACAAGCAAGCCGTTATTGAAGCCTCATACGTCAACATCCCATGCATTGCTCTCTGCGACACTGACTCCCCACTTTCCTTCATCGATGTTGCCATCCCATGCAACAACAGAAACACTGAATCCATCTCTATGATCTTCTGGCTCCTCGCCAGAGAAGTCCAAATCCTCAGAGGTGAATTGGGCAAGAACGAAGAATGGGACGTCATGGTTGACCTCTTCTTCTACAAGAAGATCGAAGATGTTGAAGAACAAGCCATCACTGGAAAGGAAGGTGAAGAAAAGGCTGATACCAAGGACCAAAAGAAGTGGGACAATCAACAAGAAGAAGAAGGTGAAGGTGAAGAACAATGGGCTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_342098.p1 GENE.R_Transcript_342098~~R_Transcript_342098.p1 ORF type:5prime_partial len:194 (+),score=35.15,Ribosomal_S2|PF00318.16|7e-06,Ribosomal_S2|PF00318.16|5.7e-16,Ribosomal_S2|PF00318.16|3.6e+03 R_Transcript_342098:3-584(+)
KIKLAARVIAAVDNPQEVIVVCARPYGQRAVIKYARYTGATATSSSRWTPGTLTNQNTIQFKEPKLLIVVDPKSDKQAVIEASYVNIPCIALCDTDSPLSFIDVAIPCNNRNTESISMIFWLLAREVQILRGELGKNEEWDVMVDLFFYKKIEDVEEQAITGKEGEEKADTKDQKKWDNQQEEEGEGEEQWAA*

Click here to download the sequence:
Link to NCBI Protein BLAST