Transcript Information: R_Transcript_34216.p2


Annotated TAIR IDAT5G50280.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)EMB1006
Annotation TypeHomolog
Chromosome Positionchr5:20459238-20461504 | Forward length=723
E-Value2E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41017889785885
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.27512207805894
Replicate 20.41874310564018
Replicate 30.20395068112794
Condition 3: 24 Hour
Replicate 10.17196859346595
Replicate 20.24781189764694
Replicate 30.24592926614491


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_34216.p2 GENE.R_Transcript_34216~~R_Transcript_34216.p2 ORF type:5prime_partial len:267 (+),score=85.04,PPR_2|PF13041.2|53,PPR_2|PF13041.2|3.3e-11 R_Transcript_34216:1-801(+)
CTTGGAGACCAAAATGATGATGATGGTGATAATGAGGAAAATGATGAAGAAAGTGAGCAAGAGGAGTTCTTATATGAGGACCCACTTTACAGGTTCTTCAAAACCCGGACTTCAACCCAAGAACAAGATCCACCACAAGAGTCCAAACTATCCCTTCAAAGAAACAGAAAAACTTCTTGGCATTTGGCTTCTGACCCTGATATATTCAAGCAAAATGAGGGTGAAGAAATCCAGTTTGAGCTCAAGGGAGATGAAATGGAGGAAAATGTTGATCTGGGTTTTGATGGGGCCCCCAAAATTGAGGGTGTTGTAGGGGAAATTCTGGGTCTTGCGAGGGACTTGCCCGAGAACTCGACTTTGGGGGAGCATTTGGGGAAGTATGAAGGAGGGAAAGTAGGGGAGAAAGAGTGTGCGGAGGTGTTGGGTTTGTTGTGTAAGGAAGGATTGATGATGAGTTGTTTGTATTTTTATGAATGGATGGCATTGCAAGAGCCCACCTCACTTGTTACTCCTAGGGCTTGTTCTGTGCTTTTTCCTGCCTTGGGGAAGGCTGGTATGGGTGATAAGCTTATGATTTTGTGGAGGAATTTGCCCCTTAATAGTAGGGATTTCAGGGATGTGCATGTTTATAATGCTGCTTTGTCTGGTTTGCTTTCCAGTGAGAGGTATGAGGATGCTTGGAAGGTGTATGAGACAATGGAGATGAATAATATCTTGCCAGATCGTGTGACAGGTTCTGTTATGATTACTATCATGCGGAAGGAAGGGAGGAGTGCCAAAGATGCGTGGGAGTTTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_34216.p2 GENE.R_Transcript_34216~~R_Transcript_34216.p2 ORF type:5prime_partial len:267 (+),score=85.04,PPR_2|PF13041.2|53,PPR_2|PF13041.2|3.3e-11 R_Transcript_34216:1-801(+)
LGDQNDDDGDNEENDEESEQEEFLYEDPLYRFFKTRTSTQEQDPPQESKLSLQRNRKTSWHLASDPDIFKQNEGEEIQFELKGDEMEENVDLGFDGAPKIEGVVGEILGLARDLPENSTLGEHLGKYEGGKVGEKECAEVLGLLCKEGLMMSCLYFYEWMALQEPTSLVTPRACSVLFPALGKAGMGDKLMILWRNLPLNSRDFRDVHVYNAALSGLLSSERYEDAWKVYETMEMNNILPDRVTGSVMITIMRKEGRSAKDAWEFF*

Click here to download the sequence:
Link to NCBI Protein BLAST