Transcript Information: R_Transcript_342468.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value6E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2918677643436
Replicate 20.38738561653686
Replicate 30.45080910398332
Condition 2: 8 Hour
Replicate 10.30117915064262
Replicate 20.35755407618132
Replicate 30.24559374763131
Condition 3: 24 Hour
Replicate 10.53652932020465
Replicate 20.54256479435615
Replicate 30.37691004380881


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_342468.p1 GENE.R_Transcript_342468~~R_Transcript_342468.p1 ORF type:5prime_partial len:813 (+),score=79.40,RVT_1|PF00078.23|8.5e-35,RVT_3|PF13456.2|1.6e+03,RVT_3|PF13456.2|4.8e-22,zf-RVT|PF13966.2|5.5e-19 R_Transcript_342468:1-2439(+)
ACAAACAGAATTAAACCCATCCTGTCCTCCCTTATATCCCCGACGCAAACCAGCTTTGTTCCTGGTCGACAAATTACAGATAATGTGGTAATTGCACAGGAGGTTATCCATACTATGCGTAGGAAGCGTGGCTCATCAGGATTTATGGCTATCAAGATCGATCTCGAGAAGGCCTATGATAGATTGCGTTGGAACTTTATCCGTGACACTCTCTTGGAGATGCGGTTTCCCCAGACTGTAGTGGAAATTATTATGAATTGTGTGACGGGACCAACTATGCGCATATTATGGAATGGTAGCCCAACGGAGCCATTTAGACCATCCAGGGGGATAAGACAGGGCGACCCGCTGTCCCCTTATCTGTTTGTCATGTGTATGGAGCGCCTCCAACACTTGATTGATATTGCGGTGGCGAGAGGCCAGTGGAAGCCCATTCCGGTATGCCGAGAAGGTCCTAGCATTTCAAGCTTGTTCTTTGCGGACGATCTAATCTTATTTGGTGAAGCCTCATGTAGTCAGGCCCAGTCAATGAAAGAGTGCTTGGATGCATTTTGCAAGGCATCAGGAGAGAAAGTTAATCTTGAGAAATCAAGGATCTACTTCTCAGGTAACACGGCTGAAAATATGCGTGAAATGGTTTGTACTGAGATGGGGATTGAAGAATGTGATGACTTGGGAATGTATTTAGGTGTTCCACTCCTCTCTGGCAGGGTGACCCGTGCCACCTATCAGGGAATCAAGGATCGAATTCATGCTAAGCTCTCGGGGTGGAAGGCGAAATGCTTATCTTTGGCTGGCAGGGCGACATTGATTCAATCCACCTTTGCCATACCTTTTTATACAATGCAATCAGCTCGTCTCCCTCGTACCCTCTATGACGACATTGATCGAACATCCAGGAAATTCTTATGGGGTGGTACCAACGGCCAAAGGAAAATCCATCTTACCTCATGGGCCTCGGTGACCCAGGAAAAGGATGCTGGGGGCTTGGGACTCCGCTCCATGCGACAAGCTAATTCAGCGTTCCTCACAAAACTAGGTTGGCGAATGCTTGCGGAGCCAACTGCCCTCTGGTCTAGAGTACTCCGAGCGAAATATTGCCAAGGTCGTTGTGATGTTGATATGTTTGAGCATAAAGTGGGCGCTTCGGCCACTTGGCGGGGGATCATGGAGAATGTCAAATACCTACGGCAAGGCGTCAATGCAGCTATCTCATCAGGGCGCTCTACCCTGTTTTGGTACCATAGATGGGCCTTGGACGAGCCCTTGGCAACAGTAGCAACACGTGACATACCTGCAGAGATGGAAGATGCTACGGTAGAGGAAATGTGGAGTGCTGAGCATGGGTGGCGTTGGGAGAAGTTTGCTGACTGGCTGCCCCAAGACGTGCTAGAGAAAATTGAGTCCCATGAAATTCACGAAGATGCTGAAGATGCTGACGTTCTTTATTGGAACGGGAGCACGACTGGTGGTTTCTCGATTAAGTCGGCTCTGAAAATTATCAGGAAGGATTTGGACCTCCCCCCTTGGGCTGGATGGAAGGTTTTGTGGAGTGCCCCGTTACCGCAGAGGATTAGATTTTTCTTGTGGCTAGCAGCTCATGATCGCTTAATGTCTAATGCCAATAGACTGATTAGAGGTCTAGCAGACGATGCTAAGTGCATAATTTGTGGCGCAGAAGAAGAGACAACAAGCCACATACTGAGAGAATGCCCTGCAGCATCGGGGTTATGGCGTAAATTGGGGATAACTGGCTTTGCACTATATGGAACGCCACTGCGTGATTGGCTCAGAGAGCATCTGACTGAAGTTAGAACCAAGAGTGATTGGTCTATAACGTTTGGGGTCACTCTATGGTGGATTTGGAGGTGGAGAAATGAGAGAGTCTTCAATGCTAATGTGAGTCTTCCTTTTGATAAGCTCAAATTCATTTGGGAAAGAGTTAAAGAGGTAAAGCATGCCTTGGGGTTAGAGGAAAAATTATACTCATCCCCTGGTACGGTACGAAGAGACATATTAGTGAGTTGGAGATCCCCGAGACATGGGTGGATGAAACTTAACACTGATGGGGCGTCCCGAGGAAATCCAGGGCCTGCGGGAGGAGGAGGAGTACTACGTGACTCAATGGGATCCTTTATGAGATGCTTCTCCGCCTCTTTTGGTGTATGCTCTAGTATGAAGGCCGAACTTTGGGCTATTCTGAAAGGCCTGACTATGGCGTGGGAGATGGGAGTGCGTGAACTAGAGCTGGAGACTGACTCACAGATTACTGTGCAGCTGTTAACAGGCGCGACACCTCAAGCATCTGGGCTCTTCCATTTGGTGAATAAATGTAGAATGCTGATTAATAAAGAAGGATGGGTGGTTCATGTCTATCACTGCTACAGGGAGGTAAACCAAGTGGCTGATAAGTTGGCGAACATTGGTGTGGATCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_342468.p1 GENE.R_Transcript_342468~~R_Transcript_342468.p1 ORF type:5prime_partial len:813 (+),score=79.40,RVT_1|PF00078.23|8.5e-35,RVT_3|PF13456.2|1.6e+03,RVT_3|PF13456.2|4.8e-22,zf-RVT|PF13966.2|5.5e-19 R_Transcript_342468:1-2439(+)
TNRIKPILSSLISPTQTSFVPGRQITDNVVIAQEVIHTMRRKRGSSGFMAIKIDLEKAYDRLRWNFIRDTLLEMRFPQTVVEIIMNCVTGPTMRILWNGSPTEPFRPSRGIRQGDPLSPYLFVMCMERLQHLIDIAVARGQWKPIPVCREGPSISSLFFADDLILFGEASCSQAQSMKECLDAFCKASGEKVNLEKSRIYFSGNTAENMREMVCTEMGIEECDDLGMYLGVPLLSGRVTRATYQGIKDRIHAKLSGWKAKCLSLAGRATLIQSTFAIPFYTMQSARLPRTLYDDIDRTSRKFLWGGTNGQRKIHLTSWASVTQEKDAGGLGLRSMRQANSAFLTKLGWRMLAEPTALWSRVLRAKYCQGRCDVDMFEHKVGASATWRGIMENVKYLRQGVNAAISSGRSTLFWYHRWALDEPLATVATRDIPAEMEDATVEEMWSAEHGWRWEKFADWLPQDVLEKIESHEIHEDAEDADVLYWNGSTTGGFSIKSALKIIRKDLDLPPWAGWKVLWSAPLPQRIRFFLWLAAHDRLMSNANRLIRGLADDAKCIICGAEEETTSHILRECPAASGLWRKLGITGFALYGTPLRDWLREHLTEVRTKSDWSITFGVTLWWIWRWRNERVFNANVSLPFDKLKFIWERVKEVKHALGLEEKLYSSPGTVRRDILVSWRSPRHGWMKLNTDGASRGNPGPAGGGGVLRDSMGSFMRCFSASFGVCSSMKAELWAILKGLTMAWEMGVRELELETDSQITVQLLTGATPQASGLFHLVNKCRMLINKEGWVVHVYHCYREVNQVADKLANIGVDQ*

Click here to download the sequence:
Link to NCBI Protein BLAST