Transcript Information: R_Transcript_342472.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1798321276327
Replicate 20.10343005131181
Replicate 30.22568214380446
Condition 2: 8 Hour
Replicate 10
Replicate 20.44060850918592
Replicate 30.26825040325695
Condition 3: 24 Hour
Replicate 10
Replicate 20.32593978656026
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_342472.p1 GENE.R_Transcript_342472~~R_Transcript_342472.p1 ORF type:complete len:203 (+),score=26.73,RVT_1|PF00078.23|8e-25 R_Transcript_342472:56-664(+)
ATGATGATTCGTACTATAACTTTTTATTTACTAATAGAGATTGTGGTCGATGGAGTGTTGGTTATTCAGTTCATGCTGATTCGTTGTGGCTATCACCCTAATTTTATTCGTGGAAGATCTCGTGTTTTTTGTGTTTACATCCCTGGTAGACTTATTACTGACAATTCTATTATGGTAAATGAGATATTATACTGTATGGGGCAAAGTCACTCTAAGAAAGGGTTGATGGCTATAAGGGTTGACATGGCTAAGGCTTATGATAAGTTAGAATGGAGTTTTGTGCTGGATGTGTTGAAAGCTCTAGGATGCTCTGATAAATTCATTCATCTTATAAACCAATGCATTTCAACTTCTTCTTATTCTGTTCTTGTCAATGGTAGACCTTTTGGTTTGAGTAAACCAAATAGAGGTTTGAGGCAGGGAGATTCACTCCCCCCTTTTCTGTTTGTGCTAGCTATGGATGCCTTTTCCAGGCTACTTCAGAGGAAGCAAGTTGAAGGGAGGATAAATGGGATTTCTATTGCTAGAGGATGTCCTCCTATATCCCATTTATTATATGCTGATGACCTTGTTATATTCAGCAGAGCTAATGAACAGAATGCTATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_342472.p1 GENE.R_Transcript_342472~~R_Transcript_342472.p1 ORF type:complete len:203 (+),score=26.73,RVT_1|PF00078.23|8e-25 R_Transcript_342472:56-664(+)
MMIRTITFYLLIEIVVDGVLVIQFMLIRCGYHPNFIRGRSRVFCVYIPGRLITDNSIMVNEILYCMGQSHSKKGLMAIRVDMAKAYDKLEWSFVLDVLKALGCSDKFIHLINQCISTSSYSVLVNGRPFGLSKPNRGLRQGDSLPPFLFVLAMDAFSRLLQRKQVEGRINGISIARGCPPISHLLYADDLVIFSRANEQNAI*

Click here to download the sequence:
Link to NCBI Protein BLAST