Transcript Information: R_Transcript_342628.p1


Annotated TAIR IDAT1G29930.1
Annotated Gene Namechlorophyll A/B binding protein 1
Annotated Gene Symbol(s)CAB1, AB140, CAB140, LHCB1.3
Annotation TypeOrtholog
Chromosome Positionchr1:10478071-10478874 | Forward length=267
E-Value6.1E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.806170489861
Replicate 21.3401893882743
Replicate 31.6570831452536
Condition 2: 8 Hour
Replicate 11.6671227198124
Replicate 21.1418322642307
Replicate 31.3903361326254
Condition 3: 24 Hour
Replicate 10.97692796713634
Replicate 20.93852165491818
Replicate 30.74511335104331


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_342628.p1 GENE.R_Transcript_342628~~R_Transcript_342628.p1 ORF type:complete len:235 (+),score=46.61,Chloroa_b-bind|PF00504.17|1.4e-40 R_Transcript_342628:49-705(+)
ATGGCAACTATGGCTCTTTCATCCCAATTCATAGGGAAGGCAGTTCCCTTGAGCTCAACAGCGGAGCCATCAACAATTGCCAGAAGTAATGGCAGAATCTCAATGAGGAAGACAGCAGCAAAGCAAGCTGCTTCCTCAGGAAGCCCATGGTATGGCCCTGACCGTGTCAAATACCTTGGCCCTTTCTCTGGTGAGCCCCCATCTTACCTCACTGGTGAGTTCCCCGGTGACTATGGATGGGACACCGCAGGATTATCAGCTGACCCAGAAACCTTCGCTAAGAACAGAGAACTTGAAGTTATCCATTGCAGATGGGCCATGCTTGGGGCTTTGGGCTGCGTCTTTCCCGAGCTTCTTTCGAGGAATGGGGTCAAATTTGGGGAGGCTGTCTGGTTCAAGGCTGGTGCCCAAATCTTCAGCGAGGGTGGTCTAGACTACCTTGGCAATCCAAGCTTGATTCACGCACAAAGCATCCTGGCCATCTGGGCTTGCCAGATTATTCTCATGGGAGCTGTTGAAGGTTACCGGGTAGCAGGTGGACCTCTAGGTGAGGTCACTGACCCTCTTTACCCAGGAGGCAGCTTTGACCCACTGGGACTAGCCGATGATCCAGAAGCATTTGCTGAGTTGAAGGTGAAAGAAATAAAAAATGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_342628.p1 GENE.R_Transcript_342628~~R_Transcript_342628.p1 ORF type:complete len:235 (+),score=46.61,Chloroa_b-bind|PF00504.17|1.4e-40 R_Transcript_342628:49-705(+)
MATMALSSQFIGKAVPLSSTAEPSTIARSNGRISMRKTAAKQAASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQIILMGAVEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG*

Click here to download the sequence:
Link to NCBI Protein BLAST