Transcript Information: R_Transcript_342669.p1


Annotated TAIR IDAT1G11950.1
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4034747-4038310 | Reverse length=875
E-Value2.7E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9315302597586
Replicate 20.88873229275336
Replicate 31.33319636803
Condition 2: 8 Hour
Replicate 10.77732904594429
Replicate 21.1831154413326
Replicate 31.9208053566547
Condition 3: 24 Hour
Replicate 12.9152771082799
Replicate 21.0502504233608
Replicate 32.3161592261267


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_342669.p1 GENE.R_Transcript_342669~~R_Transcript_342669.p1 ORF type:internal len:189 (-),score=24.22 R_Transcript_342669:1-564(-)
GATTGGCCTCCCTCGGATAAGTTTGACAATCTCTTACCTAGACACTGTGATGAGTTTATCAGCGCATTGCCATTCCAAGAGTACACAGATCCTCGGGGGGGAATCCTTAACCTTGGTGCAATGTTACCACCAACTATCTTGAAACCAGACTTGGGGCCGAAGACATATATAGCTTATGGAATAGCCCAAGAGCTTGGAAGAGGAGATTCTGTCACTAAGCTTCATTGTGACATGTCGGATGCTTTAAATATTTTGATGCATACGGCTGATGTTACCTTAAGTGAAGATCAGGATTCGGCAATCGCTATGCTCAAAAAGCAACACAGAGCTCAAGATCAAAGGGAGTTGAATTTCATGCAAGAGGACATCAAACATGGCTCTTCTACTTCAACAGAAACAGGCGCTGCTCTTTGGGACATTTTCAGGAGGGAAGACGTACCAAAACTAGAAGCGTATCTAAGAAGACATTCAAAGGAGTTCAGGCATACTTACGGTTCTCCAGTTGAACAGGTACAGTTCTCTCATAACACTAAACAATATACCTACCATTCTATTGATTTCTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_342669.p1 GENE.R_Transcript_342669~~R_Transcript_342669.p1 ORF type:internal len:189 (-),score=24.22 R_Transcript_342669:1-564(-)
DWPPSDKFDNLLPRHCDEFISALPFQEYTDPRGGILNLGAMLPPTILKPDLGPKTYIAYGIAQELGRGDSVTKLHCDMSDALNILMHTADVTLSEDQDSAIAMLKKQHRAQDQRELNFMQEDIKHGSSTSTETGAALWDIFRREDVPKLEAYLRRHSKEFRHTYGSPVEQVQFSHNTKQYTYHSIDFC

Click here to download the sequence:
Link to NCBI Protein BLAST