Transcript Information: R_Transcript_342687.p1


Annotated TAIR IDAT5G22260.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)MS1
Annotation TypeOrtholog
Chromosome Positionchr5:7367707-7370192 | Reverse length=672
E-Value4.5E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34038155626515
Replicate 20.48942425212816
Replicate 30.5339565873229
Condition 2: 8 Hour
Replicate 10.4566128661491
Replicate 20.15636980308521
Replicate 30.042311446667569
Condition 3: 24 Hour
Replicate 10.10702940432496
Replicate 20.35987601919357
Replicate 30.20408116258179


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_342687.p1 GENE.R_Transcript_342687~~R_Transcript_342687.p1 ORF type:complete len:429 (+),score=55.80,PHD|PF00628.25|1.6e+04,PHD|PF00628.25|6.3e-10 R_Transcript_342687:38-1288(+)
ATGTACCAAAAATCGATCCAAGCCTCGCAAAACATCCCCCTATGTCTTCTTCAATACCACTATAGCCCCTTAGACAGTTACCTCCCAATCATTTTCTCAAGGTACCAAGCCTTGTCTGACCATTCTTTAGTCACCCTAAATGACCTTTTCCACTTCATGCTGGAGCTTAGATCCCGCCTTCCGAAAGAGGCTGGCCCCACTGACCTGTTCAACCCGGGAATCCTTCTAGAAACCTCCTGCAGATGGTCCCCTAAACGGGTAGAGATGGCCACCAGGGTTATAGTGGAGGCCTTGAAGCGAGCTGAGCCAAAGCGGGTGTCAAGGCAAGATGTCAGAGATGCTGCTAGGGTCTATATTGGTGATACAGGTCTCCTGGATTTCGTCCTTAAATCACTTGGAAATCATGTTGTGGGTAAATACTTGGTTCGACGTAGCTTGAATCCAGTCACAAAAGTGTTGGAATATTGCCTAGAGGATATCTCAATTAGCCATGATCATGGTCTTGTATCAAGAGAATCCAAGTCAAACATGATATTGGTCACCAGAGTCCAACTAGCCAAAGACATCTTGTACCTCTACAAATCTACATTAGGGGAACGGAAGCCTGGGCTCACATCCGGACCTGGTAGCACCATCTCAATAGCCAGTAGGGTGATACTCGATAGCAAACACCTCGTGAAAGAATTTGCTGTTGAACAAAGACTTCCAACAAGAGGGAAATTTGGGATTGGTGAACAGTTAATAATTGATGTGCTGTGTACTGTGCAGTTAAAGCAGAAACAAGTAATATTGCCGTGTGAAAATTTCAAGGTAAGGGGAAGCATGACAGTCGAGGAGCTGAAAAGAGAGGTCGAGAAATGGTTTAAAGAGTTGTATTGGGGAATGAAGGGATTAGTGGTCGAATCAGTTGTGAACTTGAATACAAAAGATACAGATTTTGTTAGTGGGGTGATCGAAGAGGGAAAGGATGTCGTTTTTGATGGGGGAATTAGCGCGAATGGGAATGGATTACTTATGCAAGGGTGGAATGTGTGTGAAATAGTTGAATGCCATAATCAAGGTCATGGATTCATAGAATGTGCTTGTGGAGCCAAAGAAGATGATGGGGAAAGAATGGTTGCTTGTGATATTTGTGAAGTGTGGCAGCACACTCGATGTGTTCGAATTCCAAATAATGAAGAGGTTCCTCGTATATTTATTTGTGATCGTTGTGAGCAGGACATTATCTTCTCTCCTTCTTTGATGATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_342687.p1 GENE.R_Transcript_342687~~R_Transcript_342687.p1 ORF type:complete len:429 (+),score=55.80,PHD|PF00628.25|1.6e+04,PHD|PF00628.25|6.3e-10 R_Transcript_342687:38-1288(+)
MYQKSIQASQNIPLCLLQYHYSPLDSYLPIIFSRYQALSDHSLVTLNDLFHFMLELRSRLPKEAGPTDLFNPGILLETSCRWSPKRVEMATRVIVEALKRAEPKRVSRQDVRDAARVYIGDTGLLDFVLKSLGNHVVGKYLVRRSLNPVTKVLEYCLEDISISHDHGLVSRESKSNMILVTRVQLAKDILYLYKSTLGERKPGLTSGPGSTISIASRVILDSKHLVKEFAVEQRLPTRGKFGIGEQLIIDVLCTVQLKQKQVILPCENFKVRGSMTVEELKREVEKWFKELYWGMKGLVVESVVNLNTKDTDFVSGVIEEGKDVVFDGGISANGNGLLMQGWNVCEIVECHNQGHGFIECACGAKEDDGERMVACDICEVWQHTRCVRIPNNEEVPRIFICDRCEQDIIFSPSLMM*

Click here to download the sequence:
Link to NCBI Protein BLAST