Transcript Information: R_Transcript_343465.p1


Annotated TAIR IDAT5G10780.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 395 Blast hits to 395 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 122; Plants - 51; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3408422-3409784 | Forward length=187
E-Value2.7E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1150.13561840228
Replicate 2145.12827430606
Replicate 3158.96269002165
Condition 2: 8 Hour
Replicate 1130.23251246667
Replicate 2143.37994015749
Replicate 3164.56130507494
Condition 3: 24 Hour
Replicate 1156.9203966553
Replicate 2158.99175639801
Replicate 3151.77078744431


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_343465.p1 GENE.R_Transcript_343465~~R_Transcript_343465.p1 ORF type:complete len:182 (+),score=45.69,DUF1077|PF06417.8|1.7e-38 R_Transcript_343465:1-546(+)
ATGGAGAAGGGGAAAGGAGTAATGGGGACTAATGGTAGAAGATGGGCAGTTGAATTCACTGACAATTCTACTGCTCCTTCTTCTCGTGACTTTCCTGATCCTCCTGGTTTCACTCGGGCTTCTCAAGATCAGGATGATTCATCTCTCAGTCGTCAAAAGAAGGACGCTGAATCTAATTGGAAAGCTCAGAAAGCATGGGAGGTAGCACAAGCTCCTTTCAAGAATTTGATGATGATGGGCTTCATGATGTGGATGGCTGGAAGCACCGTACATTTGTTCAGCATCGGTATAACATTTTCAGCTTTCTGGCAGCCCATCAGTGCTCTTCAAGGTGTTGGAAAAGTTTTTGAGCCTTACAAGGACAGCAAAGTTGATCTTAACGCACCCAAGCTGCTTTACATTGCTCTGAATTTGGTGGGTCTTGGCCTTGGTATCTGGAAGCTAAACGCGCTGGGTCTTTTACCAACTCATGCATCAGATTGGGTGTCATCCTTACCACCTGCTCAGGATGTCGAATACTCTGGTGGTGGCTTGCCTCTGTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_343465.p1 GENE.R_Transcript_343465~~R_Transcript_343465.p1 ORF type:complete len:182 (+),score=45.69,DUF1077|PF06417.8|1.7e-38 R_Transcript_343465:1-546(+)
MEKGKGVMGTNGRRWAVEFTDNSTAPSSRDFPDPPGFTRASQDQDDSSLSRQKKDAESNWKAQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSAFWQPISALQGVGKVFEPYKDSKVDLNAPKLLYIALNLVGLGLGIWKLNALGLLPTHASDWVSSLPPAQDVEYSGGGLPLY*

Click here to download the sequence:
Link to NCBI Protein BLAST