Transcript Information: R_Transcript_343600.p1


Annotated TAIR IDAT5G12350.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3995789-4000545 | Forward length=1075
E-Value4.8E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76054003977995
Replicate 20.14580764177985
Replicate 31.2725965331196
Condition 2: 8 Hour
Replicate 11.0202443728019
Replicate 20.6211356066996
Replicate 31.1344756637742
Condition 3: 24 Hour
Replicate 11.2754337348725
Replicate 21.5316152007345
Replicate 31.5199794921456


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_343600.p1 GENE.R_Transcript_343600~~R_Transcript_343600.p1 ORF type:3prime_partial len:144 (+),score=25.75,PH_12|PF16457.1|1.8e-09 R_Transcript_343600:685-1113(+)
ATGGATAGGATGGGTTCGGATCTTACACGTAATGGTCCTGTCGAAAGAGATATTGAGCAGGCAATTACAGCCCTTAAGAAGGGTGCATATCTTCTTAAATATGGAAGAAGAGGAAAGCCAAAATTTTGTCCATTTCGTCTATCTAATGATGAGTCTGTTTTGATATGGTTCTCGGGGAAAGAGGAGAAGCACCTCAAGCTAAGCCATGTTTCCAGAATCATATCTGGTCAGCGCACACCAATTTTCCAAAGGTATCCTCGTCCAGAGAAGGAATACCAGTCTTTTTCTCTCATATATAATGATAGATCATTGGATTTGATTTGCAAAGATAAAGATGAAGCTGAGGTATGGTTTAGTGGTCTCAAAGCCTTAATATCAAGGAGCCATCAAAGGAAATGGAGAACAGAATCTAGGAGTGATGGAATTCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_343600.p1 GENE.R_Transcript_343600~~R_Transcript_343600.p1 ORF type:3prime_partial len:144 (+),score=25.75,PH_12|PF16457.1|1.8e-09 R_Transcript_343600:685-1113(+)
MDRMGSDLTRNGPVERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHQRKWRTESRSDGIP

Click here to download the sequence:
Link to NCBI Protein BLAST