Transcript Information: R_Transcript_3439.p1


Annotated TAIR IDAT1G18870.1
Annotated Gene Nameisochorismate synthase 2
Annotated Gene Symbol(s)ICS2, ATICS2
Annotation TypeOrtholog
Chromosome Positionchr1:6515486-6519176 | Forward length=562
E-Value8.1E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.353808947869
Replicate 210.134052513069
Replicate 316.41870209204
Condition 2: 8 Hour
Replicate 19.4121966415711
Replicate 213.571633487425
Replicate 313.37763210462
Condition 3: 24 Hour
Replicate 110.218214777649
Replicate 28.0316838734472
Replicate 310.437778246642


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3439.p1 GENE.R_Transcript_3439~~R_Transcript_3439.p1 ORF type:complete len:346 (+),score=80.78,Chorismate_bind|PF00425.14|1.3e-58 R_Transcript_3439:645-1682(+)
ATGGTTCCTCAGGTTGAGTTTGATGAGCTTGAAGGTAAATCCTTGCTGGCTGCTAATGTTGCATGGGACGATTCCCTTTCATGCTCTTGGGAAATGGCAATTGATTCCCTTCAAGCTACATTAGACCAGGTCACATATGTTATTAAGAAGTTGGAGAAAGATGCCCATAAAACATCCATTACTGGCAATATTCTCCATGTCCCCAGTGAGACAGATTGGGATAGTGCTGTTAAGAAAGCAGTGCATATGATCAGAAGAAGCAGCTCAACACTAACTAAGGTTGTACTTGCACGTAGCAGCAGAATATTTACTGCCTCTGATATTGATCCGGTAGCATGGTTAGCTTGTTTACAGGTGGAGGGGGATAATGCTTACCAGTTCTTGCTTCAGCCACCTAATGCGCCAGCTTTCATCGGAAACACTCCAGAGCAGCTCTTTTACCGGAAGAACTTGAGTATTTGGAGTGAAGCTTTGGCTGGAACCCGAGCAAGATATGGATCAAGGACCTTAGATCACGCAACAGGACTTGATCTTCTCTCCAGCCCCAAAGATGACTTAGAGTTTACAATTGTTCGAGAGTGCATAAGAAAGAAGCTTGAGGCTGTATGTAACTCAGTACTAGTTGATCCCAAGAAGGCAGTCCGAAAGCTTCCACGAGTCCAGCATTTGTATGCTCAATTAAAAGGCAGATTAAGAAATGAAGATGATGAGTTTGACATTTTGTCTTCTCTTCACCCAAGTCCAGCTGTATGTGGATTCCCTACAGAAGAAGCAAGATGCCTAATTACCGAGACTGAGATGTTCGACCGAGGAATGTACGCTGGTCCTGTTGGTTGGTTTGGAGGTAAAGAAGCTGAGTTTGCAGTTGGTATTAGGTCAGCCTTAGTGAAGCAGGGTTTTGGTGCTTTGATCTTTGCTGGAACTGGCATAGTTGAAGGAAGCAATCCTTCCTCAGAATGGGAAGAATTAGAGCTAAAGATTATGCAGTTTACCAGGTTATTGAGACTTGAAGTGCCTCTCTTGGATAGTGTGATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3439.p1 GENE.R_Transcript_3439~~R_Transcript_3439.p1 ORF type:complete len:346 (+),score=80.78,Chorismate_bind|PF00425.14|1.3e-58 R_Transcript_3439:645-1682(+)
MVPQVEFDELEGKSLLAANVAWDDSLSCSWEMAIDSLQATLDQVTYVIKKLEKDAHKTSITGNILHVPSETDWDSAVKKAVHMIRRSSSTLTKVVLARSSRIFTASDIDPVAWLACLQVEGDNAYQFLLQPPNAPAFIGNTPEQLFYRKNLSIWSEALAGTRARYGSRTLDHATGLDLLSSPKDDLEFTIVRECIRKKLEAVCNSVLVDPKKAVRKLPRVQHLYAQLKGRLRNEDDEFDILSSLHPSPAVCGFPTEEARCLITETEMFDRGMYAGPVGWFGGKEAEFAVGIRSALVKQGFGALIFAGTGIVEGSNPSSEWEELELKIMQFTRLLRLEVPLLDSVI*

Click here to download the sequence:
Link to NCBI Protein BLAST