Transcript Information: R_Transcript_344217.p1


Annotated TAIR IDAT3G53700.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)MEE40
Annotation TypeHomolog
Chromosome Positionchr3:19900303-19902567 | Forward length=754
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1474071711434
Replicate 20.77192280942272
Replicate 31.1790232586255
Condition 2: 8 Hour
Replicate 11.4403449968968
Replicate 20.82209124416124
Replicate 31.334677251499
Condition 3: 24 Hour
Replicate 12.1944962791188
Replicate 21.1351971487797
Replicate 31.2875120404057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_344217.p1 GENE.R_Transcript_344217~~R_Transcript_344217.p1 ORF type:5prime_partial len:136 (-),score=7.28,PPR_2|PF13041.2|1.6e-16,PPR_2|PF13041.2|3.4e-13,PPR_2|PF13041.2|0.00021,PPR_1|PF12854.3|1.5e-09,PPR_1|PF12854.3|5.6e-11,PPR_1|PF12854.3|0.0023,PPR_1|PF12854.3|1.2e+02,PPR|PF01535.16|1.8e-09,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|0.027,PPR_3|PF13812.2|4.6e-06,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|29 R_Transcript_344217:198-605(-)
TTAGTGACATATAATACAGTTATTAATGGATTCTGCCAATGTGGCAAGTTTAAGGAGGCATTGCTCGTGTTAGGAAAAATGTTGATTAACGGAATAAGACCTGATGGGATTACATTCAATACTTTGATTAATGCATATTGTCAGTATGGGGAGGTCAAAAGCTCGATTTCATTAATGGATAGGATGAAAGCCAGAGAGTGCCGTCCAGACTTGGTTTCGTATACTGGCATTTTGTGTAGTCTCTGCGAGTGGAGTGGTATAGATGAGGCAACTGATTTTCTTTATAAGATGATAGATGACGGGATTGTACCAAATAATGGCATCTGGGATATTTTGGTACGGTCCTTCTTCAGCACAACTGGATGTCTACACCTGACTCAATCCATTGATCATATCTTGGCTGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_344217.p1 GENE.R_Transcript_344217~~R_Transcript_344217.p1 ORF type:5prime_partial len:136 (-),score=7.28,PPR_2|PF13041.2|1.6e-16,PPR_2|PF13041.2|3.4e-13,PPR_2|PF13041.2|0.00021,PPR_1|PF12854.3|1.5e-09,PPR_1|PF12854.3|5.6e-11,PPR_1|PF12854.3|0.0023,PPR_1|PF12854.3|1.2e+02,PPR|PF01535.16|1.8e-09,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|0.027,PPR_3|PF13812.2|4.6e-06,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|29 R_Transcript_344217:198-605(-)
LVTYNTVINGFCQCGKFKEALLVLGKMLINGIRPDGITFNTLINAYCQYGEVKSSISLMDRMKARECRPDLVSYTGILCSLCEWSGIDEATDFLYKMIDDGIVPNNGIWDILVRSFFSTTGCLHLTQSIDHILAD*

Click here to download the sequence:
Link to NCBI Protein BLAST