Transcript Information: R_Transcript_344328.p1


Annotated TAIR IDAT5G45140.1
Annotated Gene Namenuclear RNA polymerase C2
Annotated Gene Symbol(s)NRPC2
Annotation TypeOrtholog
Chromosome Positionchr5:18247416-18257713 | Reverse length=1161
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43398648423807
Replicate 20.46984728204303
Replicate 30.64074790478748
Condition 2: 8 Hour
Replicate 10.47944350945655
Replicate 20.34401356678747
Replicate 30.50773736001082
Condition 3: 24 Hour
Replicate 10.38530585556986
Replicate 20.40100470710141
Replicate 30.45918261580904


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_344328.p1 GENE.R_Transcript_344328~~R_Transcript_344328.p1 ORF type:5prime_partial len:715 (+),score=106.57,RNA_pol_Rpb2_6|PF00562.24|7.6e-117,RNA_pol_Rpb2_7|PF04560.16|1.5e-27,RNA_pol_Rpb2_4|PF04566.9|4.4e-22,RNA_pol_Rpb2_3|PF04565.12|1.7e-17,RNA_pol_Rpb2_5|PF04567.13|5.8e-12 R_Transcript_344328:2-2146(+)
AAACGGTTCGGAGTGGACAGGACAGGTGTTACCGAGGTACTTGGGAGGTTGTCTTTCATTCAAACCTTGGGAGCTCTTACTAAGATTAAGTCACAGTTTGAGAAATCCGCAAAAGTTAGTGGACCTAGATCCTTGCACCCTAGCCAGTGGGGAATGATCTGCCCTTGTGATACACCAATAGGGCATTTGATTGGATTGGTGAAGAATTTGGCATTGATGACTCATGTTACTACTGATGAAGAGGAAGGCCCATTAATATTTTTGTGTCGTTGCTTGGGTGTTGAGGACCTGGAGCTACTCTCTGGAGAAGAAATTCAGTCCCCGAGTTCTTTTCTTATCATCTTTAATGGTCACATTATTGGCAAGCATAGAAGGGCACATCACTTTGCTACTTCCATGAGAAGATTGCGGAGAGCTGGAAAGATCAGTGAGCTTGTTAGTGTGTTTGTGAATGACAAGCAGCGTTGTGTGTATATTGCTTCTGATGGAGGTCGTGTTTGTCGCCCACTAATTATTGCTGATAAAAGGGTATCAAGGGTCAAACAGCATCATCTGCAGGAGTTGTCAGATGGAGTCCTCACCTCCCAGGGTTTCTTAAGAGAGGGTTTGGTCGAGTATCTTGATGTGAATGAGCAAAATAATGCTTTGATTGCATTGTACGAGGAAGATGCCACGACTGAAACAACTCACATCGAAATTGAGCCATTTACATTGTTAGGTGTTTGTGCAGGCTTAATCCCTTTTCCCCATCACAATCAGTCACCCAGAAATACCTATCAGTGTGCTATGGGAAAGCACGCTATGGGAAATGTTGCATATAATCAGTTTACCCGCATGGACACATCACTCAATCTTTTAGTGTATCCTCAACGGCCTTTGCTGACAACAAATACAATCGAGTTGGTATCGTATGATAAGCTTGGTGCTGGGCAGAATGCCACTGTTGCTGTTATGAGCTACTCTGGATATGACGTAGAGGATGCTATAGTATTGAACAAAGCCTCGTTAGATCGTGGATTTGGAAGATGTATGGTGATGAAGAAGAATGGTACTATCATGCAAAGGTTTGGGATTAATGCATCTGAAAGAACCATTCCACCAGTCAGAGAGGGCGCATCTGCACAAAAATTGCAGGCACTGGACCATGACGGTATTGCTTCACCGGGGCAATTTATCAGACAAGATGACATTTTAGTCAACAAACAAACACCACTAATTACAAGGGGGCTGGTCCCATCAGGACTAATACCAGATAGCCAATATAGGCCAGCCTCCCTCAAACACAAGGGAGAAACATCTGTGGTAGATCGAGTGGCACTCTTCTCGGACAAAAATAGCAATCAGTGCATCAATCTGATATATCGACAGACTAGACGTCCTGAGATTGGTGACAAGTTCAGTAGCAGACATGGTCAGAAAAGTGTATGTGGTACTATTGTTGATCAGGAGGACTGTGTGTTCTCTGAAAGTGGCATTTGCCCTGATCTGATCATGAACCCTCATGGCTTTCCAAGCCGTATGACTGTAGGTAAGATGATTGAGCTTATAGGGGGAAAAGCTGGAGTCTCCTGTGCGAGGTTTCACTATGGAAGCGCCTTTGGGGAACCGAGTGGCCATGCTGACAAAGTCGAGGCTATAAGTGAGACATTAGTGAAGCACAGATACAGCTATAGTGGGAAAGACTTCCTCTATTCTGGCATAACAGGTTCACCATTGGAAGCATATGTGTTTATGGGACCAATTTACTATCAGAAGCTCAAACACATGGTGGTAGACAAAATGCATGCTCGTGGTATGGGCCCCAAAACCCTCTTAACTAGGCAGCCAACTCAGGGAAAAATGAGAAATGGAGGAGTTCGAATTGGAGAAATGGAGCGTGATTGCCTGATTTCTTATGGTGCTAGTAGTCTGGCGTATGAACGGATGTTTCTTTCCTGTGACCCTTATCAAGTTTACGTATGTAGAGCTTGTGGAATTTTGGGATACTTCAGCCATAAACTGAAAGCAGGTGTTTGTAGTTCCTGTAAAAATGGGGACAATGTCTCTAACATAATGTTGCCGTATTCTTGCAAGCTGCTCTTCCAGGAACTACAGTCCATGAACATTGTTCCTCGTATCAAGTTGTCCGATGATATCATGACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_344328.p1 GENE.R_Transcript_344328~~R_Transcript_344328.p1 ORF type:5prime_partial len:715 (+),score=106.57,RNA_pol_Rpb2_6|PF00562.24|7.6e-117,RNA_pol_Rpb2_7|PF04560.16|1.5e-27,RNA_pol_Rpb2_4|PF04566.9|4.4e-22,RNA_pol_Rpb2_3|PF04565.12|1.7e-17,RNA_pol_Rpb2_5|PF04567.13|5.8e-12 R_Transcript_344328:2-2146(+)
KRFGVDRTGVTEVLGRLSFIQTLGALTKIKSQFEKSAKVSGPRSLHPSQWGMICPCDTPIGHLIGLVKNLALMTHVTTDEEEGPLIFLCRCLGVEDLELLSGEEIQSPSSFLIIFNGHIIGKHRRAHHFATSMRRLRRAGKISELVSVFVNDKQRCVYIASDGGRVCRPLIIADKRVSRVKQHHLQELSDGVLTSQGFLREGLVEYLDVNEQNNALIALYEEDATTETTHIEIEPFTLLGVCAGLIPFPHHNQSPRNTYQCAMGKHAMGNVAYNQFTRMDTSLNLLVYPQRPLLTTNTIELVSYDKLGAGQNATVAVMSYSGYDVEDAIVLNKASLDRGFGRCMVMKKNGTIMQRFGINASERTIPPVREGASAQKLQALDHDGIASPGQFIRQDDILVNKQTPLITRGLVPSGLIPDSQYRPASLKHKGETSVVDRVALFSDKNSNQCINLIYRQTRRPEIGDKFSSRHGQKSVCGTIVDQEDCVFSESGICPDLIMNPHGFPSRMTVGKMIELIGGKAGVSCARFHYGSAFGEPSGHADKVEAISETLVKHRYSYSGKDFLYSGITGSPLEAYVFMGPIYYQKLKHMVVDKMHARGMGPKTLLTRQPTQGKMRNGGVRIGEMERDCLISYGASSLAYERMFLSCDPYQVYVCRACGILGYFSHKLKAGVCSSCKNGDNVSNIMLPYSCKLLFQELQSMNIVPRIKLSDDIMT*

Click here to download the sequence:
Link to NCBI Protein BLAST