Transcript Information: R_Transcript_344555.p1


Annotated TAIR IDAT1G20230.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7009570-7011852 | Forward length=760
E-Value2E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45632402386797
Replicate 20.098420158201397
Replicate 30.46529310742185
Condition 2: 8 Hour
Replicate 10.15303665592028
Replicate 20.48914429027593
Replicate 30.45379026550967
Condition 3: 24 Hour
Replicate 10.50220203310603
Replicate 20.41353610419832
Replicate 30.82078892575865


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_344555.p1 GENE.R_Transcript_344555~~R_Transcript_344555.p1 ORF type:complete len:640 (+),score=110.77,PPR_2|PF13041.2|53,PPR_2|PF13041.2|5.6e-08,PPR_2|PF13041.2|0.048,PPR_2|PF13041.2|3.2e-07,PPR_2|PF13041.2|0.00024,PPR_2|PF13041.2|0.0004,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|0.0037,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|0.047,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|0.98,PPR|PF01535.16|9.7,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.0064,PPR|PF01535.16|3.1e-07,PPR|PF01535.16|0.0064,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|76,PPR|PF01535.16|0.43,PPR|PF01535.16|0.001,PPR|PF01535.16|0.00055,PPR|PF01535.16|0.0088,PPR|PF01535.16|0.012,PPR|PF01535.16|0.016,PPR_1|PF12854.3|9.5,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|3,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|2e-05,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|0.0028,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|7.3,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|0.77,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.00064,PPR_3|PF13812.2|0.0059,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|51,PPR_3|PF13812.2|6.8e+02,PPR_3|PF13812.2|0.068,PPR_3|PF13812.2|8.8,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|0.0072,PPR_3|PF13812.2|0.0026,TPR_14|PF13428.2|3.5e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|4.4e+03,TPR_14|PF13428.2|4.1e+02,TPR_14|PF13428.2|31,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|7.2e+02,TPR_14|PF13428.2|1.3,TPR_14|PF13428.2|1.6e+03,TPR_19|PF14559.2|9.6e+02,TPR_19|PF14559.2|9.6e+02,TPR_19|PF14559.2|70,TPR_19|PF14559.2|6.6,TPR_19|PF14559.2|6.6 R_Transcript_344555:175-2094(+)
ATGAGATCAAAATGGCACCTTCTAAGCCATTTCTCATCTCTTCCAATCACCGATTTCTCTTTTCTTTCCTCTTCACTACTCACCCACCTTCTCCAACTTTGCAGCAATTCAAGAGCATTACTTCAAGCCAAACAAACCCACCAGCAAATTATACAGCAAGGGTTACATAAGGACCAATTCATTATCACCAAATTAGTTCAGTCCTATGCCGAGTGTAACCATTTAGATTATGCACACAAGCTGTTCGACGAATTGTCTGAACCAAATGTTTTTGCTTGGACTACCCTCCTTGCATTTTACTCAAAGAATGGGCTTTTCAATGAATGTCTGAGGGTTTATGGTGCAATGAGATTTCATGGTGTGCTGCCTGATCAGTATGTTTTCCCCAAGGTCTTGAGGGCATGTGCTCAATTGTCAGTGCTTGAGACTGGAACAATGGTTCATAAAGATGTAATTGTACGTGGGGTTGAGTTTAATTTGCAAGTTTGCAGTTCATTGATTGACATGTATGCAAAATGTGAGGAGATTGAGAGTGCTAGACGGGTTTTCGACAATATGATGGTAAGAGACTTGTTGTCATGGAATGCAATGATTTCTGGTTATGTGGCCAATGGGTTTCCTGAATTAGCTGCGGAGTTATTTGGGTCAATGAGGGTTGATGGCATTGAACCTGATTTAGTCACTTGTAACTCCGTAATGGATGCTTACTTTCGGATGGGCAAGCGTGAGGCGGCTCTCAGAGTTTTTGAGCAGACTGTTGAGCCTAATATTATCTCTTGGACCACTCTAGTTTCTGGCTATGCGAGGAATGGGGATCATGAGGCATCTTTGAGGACTTTTAGGGATATGATGAAGTATGTGGTGTTTATTCCTGATCTAAACTCTCTGTCTAGTGCAATGGTGTCTTGCCGCCATTTGAAGGCTCAAAGAAACGGGCAAGAGATTCATGCATATGGGATGAAAACTCATTCGCATTGCTCATTTTACAAGTCAGTTGGACCTGCCTTACTGACAATGTACTCTAGGTGTGGGAGAAATTATGATATGAGGAATGTGTTCGAGTTGATGGACATATTCGATGTTGTTACTTGGAATGCCATGATTTTTGGCCTCATTGACCTAGCAATGGGACATCCAGCTCTTGAAGCATTCCGCAAGATGCAGGTTTTAAGGATCAAGACTGATCAAACCACACTATCAACTATCTTGCCTGTTTGCAGTCTGAAGTCTGGCAAACAAATTCACGCCTACATTTTAAGGAACATCTTCTTGTCTGTAGTTCCTGTCTTGAATGCTTTGATCAGCATGTACTGTAAATGTGGATCCATCGATACTGCAAACCTTGTTTTCTCCAAGATGTCAACAAGAGATTTAGTCTCATGGAATACTATAATTGGGGGGTTTCCAATGCACGGCAAAGGAGATAGTGCTCTTCAGCTTCTAAAGAAGATGGTAGCTTCTGGTCTTTACCCTGACTCTGTCACTTTGACATCAGCTCTTGCAGCATGCAGTCACTCAGGTCTTTTCGAAGAGGGGATTGAGCTATTCCACAGCATGAGTAGAGATTTTGGGTTGGTTCCCAAGATAGAGCATTTTGCTTGTCTAGTTGATATGTTAGCACGAGCTGGTAAGCTCGATGATGCACTTGATGTTCTAAAGCGAATGCCTCTGAAGCCAGACAAGCATATATGGGGGACCCTGTTAGCTGCTGGGCAAGCCTTGCAGAATGAGGAAGTTGCCAAGTTGGCTGCTGAAAATCTTGTGTGCTTAGAGCCTCAAAATGCAGGGCACTATGTAACATTATCAAACATATACGCCAAGGATGGAAGATGGGACGATGCAATGAGGACAAGAAGGTTGATGGAAAGCCGAGGGTTGATGAAACCAACAGGAAGTAGTTGGATAGGACAGGAAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_344555.p1 GENE.R_Transcript_344555~~R_Transcript_344555.p1 ORF type:complete len:640 (+),score=110.77,PPR_2|PF13041.2|53,PPR_2|PF13041.2|5.6e-08,PPR_2|PF13041.2|0.048,PPR_2|PF13041.2|3.2e-07,PPR_2|PF13041.2|0.00024,PPR_2|PF13041.2|0.0004,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|0.0037,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|0.047,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|0.98,PPR|PF01535.16|9.7,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.0064,PPR|PF01535.16|3.1e-07,PPR|PF01535.16|0.0064,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|76,PPR|PF01535.16|0.43,PPR|PF01535.16|0.001,PPR|PF01535.16|0.00055,PPR|PF01535.16|0.0088,PPR|PF01535.16|0.012,PPR|PF01535.16|0.016,PPR_1|PF12854.3|9.5,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|3,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|2e-05,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|0.0028,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|7.3,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|0.77,PPR_3|PF13812.2|0.39,PPR_3|PF13812.2|0.00064,PPR_3|PF13812.2|0.0059,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|51,PPR_3|PF13812.2|6.8e+02,PPR_3|PF13812.2|0.068,PPR_3|PF13812.2|8.8,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|0.0072,PPR_3|PF13812.2|0.0026,TPR_14|PF13428.2|3.5e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|4.4e+03,TPR_14|PF13428.2|4.1e+02,TPR_14|PF13428.2|31,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|7.2e+02,TPR_14|PF13428.2|1.3,TPR_14|PF13428.2|1.6e+03,TPR_19|PF14559.2|9.6e+02,TPR_19|PF14559.2|9.6e+02,TPR_19|PF14559.2|70,TPR_19|PF14559.2|6.6,TPR_19|PF14559.2|6.6 R_Transcript_344555:175-2094(+)
MRSKWHLLSHFSSLPITDFSFLSSSLLTHLLQLCSNSRALLQAKQTHQQIIQQGLHKDQFIITKLVQSYAECNHLDYAHKLFDELSEPNVFAWTTLLAFYSKNGLFNECLRVYGAMRFHGVLPDQYVFPKVLRACAQLSVLETGTMVHKDVIVRGVEFNLQVCSSLIDMYAKCEEIESARRVFDNMMVRDLLSWNAMISGYVANGFPELAAELFGSMRVDGIEPDLVTCNSVMDAYFRMGKREAALRVFEQTVEPNIISWTTLVSGYARNGDHEASLRTFRDMMKYVVFIPDLNSLSSAMVSCRHLKAQRNGQEIHAYGMKTHSHCSFYKSVGPALLTMYSRCGRNYDMRNVFELMDIFDVVTWNAMIFGLIDLAMGHPALEAFRKMQVLRIKTDQTTLSTILPVCSLKSGKQIHAYILRNIFLSVVPVLNALISMYCKCGSIDTANLVFSKMSTRDLVSWNTIIGGFPMHGKGDSALQLLKKMVASGLYPDSVTLTSALAACSHSGLFEEGIELFHSMSRDFGLVPKIEHFACLVDMLARAGKLDDALDVLKRMPLKPDKHIWGTLLAAGQALQNEEVAKLAAENLVCLEPQNAGHYVTLSNIYAKDGRWDDAMRTRRLMESRGLMKPTGSSWIGQEN*

Click here to download the sequence:
Link to NCBI Protein BLAST