Transcript Information: R_Transcript_34503.p1


Annotated TAIR IDAT2G20580.1
Annotated Gene Name26S proteasome regulatory subunit S2 1A
Annotated Gene Symbol(s)RPN1A, ATRPN1A
Annotation TypeOrtholog
Chromosome Positionchr2:8859211-8864699 | Forward length=891
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 191.815452757703
Replicate 267.657352402909
Replicate 385.893867455517
Condition 2: 8 Hour
Replicate 169.025516493743
Replicate 275.527313749613
Replicate 3101.38536479476
Condition 3: 24 Hour
Replicate 199.783095101418
Replicate 290.931737772324
Replicate 3103.32463944373


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_34503.p1 GENE.R_Transcript_34503~~R_Transcript_34503.p1 ORF type:complete len:895 (+),score=218.24,PC_rep|PF01851.18|0.0033,PC_rep|PF01851.18|0.00031,PC_rep|PF01851.18|0.00039,PC_rep|PF01851.18|0.35,PC_rep|PF01851.18|1.6e+02,PC_rep|PF01851.18|4.2e+03,PC_rep|PF01851.18|1.3e+02,PC_rep|PF01851.18|0.0033,PC_rep|PF01851.18|3.1e+02,HEAT_2|PF13646.2|2.1e+02,HEAT_2|PF13646.2|8.3e+03,HEAT_2|PF13646.2|1.8,HEAT_2|PF13646.2|1.3,HEAT_2|PF13646.2|0.003,HEAT_2|PF13646.2|0.0092 R_Transcript_34503:257-2941(+)
ATGGACCCCGAACCAAGCAACACCGGTGCCGGAGCCCCACCCGGTGGTCGTAAAGAAGCGACGACTAAAGTTCCGTCCAAAGACCCTAAGAAGAAGGACGAAAAAAGGGACGAAGATCTTTCAGAAGAGGATTTGGCGTTGAAGCAGCAATTGGAATTGTACGTTGAGCGAGTTCAGGATCCCGATCCTGGGTTGCAAAAAGTTGCTCTTGAGAGTATGAGGCAGGAAATCAGAACATCTACAAGTTCGATGACGTCTGTTCCAAAGCCTTTAAAGTTTCTTCGCCCTCATTATGGAACTCTGAAAGCGTATTATGAAACAATGAAGGACTCTGACCTAAAGAGATTCTTGGCCGACATACTTTCTGTTTTAGCATTGACCATGTCAGCAGAGGGTGAAAGGGAAAGTTTGAAGTACCGTTTGTTGGGCTCTGAAGGAGACATTGGTTCTTGGGGTCATGAATATGTCAGGAACTTGGCAGGAGAAATAGCTGAAGAATATGCAAAACGGCAGAATGAAGAAGCTCCAATTTATGATTTGATGGACCTTGTCCAACAAATTGTTGCATTTCATATGAAGCACAATGCTGAGCCTGAAGCAGTAGATCTTCTGATGGAGGTTGAAGACCTTGACTTGTTGGTTGAGCATGTTGATAAGACAAATTACAAAAGGACATGCTTGTATTTGACTGCTGCAGCAAAATACCTTCCTGGTCCAGATGATATGTTAGTTTTGGACATTGCATACACTATTTATTGCAAGTTTGAGGAGTATGCCTGTGCACTTCAGGTTGCACTGTTCTTGGACAACATGCAGTACATTAAGCAGATCTTCACATCGTGCAATGATCTTCTACGTAAAAAGCAATTCTGCTACATCCTTGCTCGACATGAGGTGGCCTTCGAACTTGATGAAGAGATGGTTGCAGATGATGAAGATAGGGAGCAATTACAAGAAATCATCAATAACTCTAAATTAAGTGAAGGCTATCTAACCCTTGCTCGTGACATTGAAGTCATGGAACCAAAGTCTCCAGAGGACATCTATAAGGCTCACTTACTTGATGGTCGAGCAAGTGCTGGTGCGACTGTTGATTCTGCAAGGCAAAATTTGGCAGCAACCTTTGTCAATGCATTTGTAAATGCTGGTTTTGGCCAGGACAAATTAATGACGATCTCAGCTGAAACCTCAACTGGTGCTTCCTCTGGAAACTGGCTCTTTAAGAACAAAGAACATGGGAAAACCAGTGCAGCAGCAAGTCTGGGTATGATCTTGTTGTGGGATGTTGATACCGGACTTGCGCAACTTGACAAGTACTTCCACAGTACTGATGCCCATGTTATTGCGGGGGCATTACTTGGTGTTGGTATTGTGAACTGTGGCATCAAAAATGATTGTGATCCAGCTCTGGCACTTCTGGGCGAGTATATCGACAAAGATGATGCTTCCATTCGAATTGGTGCCATTATGGGTTTGGGAATTACTTATGCTAACACACAAAATGAACAGATACGTGATAGGTTGACTCCAGTGCTCGGGGACACTAAAGCTTCTCTTGATGTCATTGCCTTCACTGCCATTTCTCTGGGTTTGGTATATGTTGGTTCCTGCAATGAAGAGGTTGCCCAGGCAATTATATTTGCATTGATGGATCGTAGTGAGTCTGATCTAGGGGAGCCACTTGCCAAGCTTCTGCCCCTTGGTCTTGGTCTTCTTTATCTGGGCAAACAGGAAAGCGTGGAGGCAACAGCAGAAGTGTCTAAAACTTTCAACGAGAAGATCAGAAAACATTGTGATATGACGCTGCTTTCTTGTGCTTATGCTGGAACTGGAAACGTGCTTAAGGTCCAAAGTTTGTTGGGTCATTGTGCTCAACATCTTGACAAGAGTGAAACCCATCAGGGTCCAGCTGTTTTGGGTATTGCTATGATAGCAATGGCTGAAGAACTGGGCCTGGAGATGGCAATTCGTTCATTGGAACATCTTTTGCAGTATGGAGAGCAGAATATTCGTCGTGCAGTTCCCCTTGCTCTTGGTCTCTTGTGCATATCAAATCCGAAGGTAACTGTTATGGACACATTGAGTAGATTGAGCCATGATTCTGACTCAGAAGTAGCAATGGCTGCCATCATTTCTCTGGGTTTCATAGGTGCTGGTACCAACAATGCCCGGATTGCTGGCATGCTCAGAAACCTGTCAAGTTATTACTACAAGGATGCCAGTGCATTGTTTTGTGTTCGGATTGCTCAAGGTCTTGTTCATATGGGGAAGGGTCTTTTAACTCTCAATCCTTACCATTCTGACCGCTTCTTGCTATCACCGGTGGCTCTGGCTGGACTAGTAACTATGCTTCATGCATGTCTTGATATGAAAGCAATCATCTTAGGAAAATATCATTATGTTCTCTACTTCCTTGTCCTTGCAATGCAGCCAAGAATGTTGTTGACTGTGGATGAGAACCTGAAGCCCCTTTCAGTACCTGTTCGGGTGGGTCAAGCTGTTGATGTGGTTGGCCAGGCAGGTAGACCCAAGACCATAACAGGGTTTCAAACTCATTCAACCCCTGTTCTTCTCTCTGCTGGTGACAGGGCGGAACTGGCTACCGAAAAGTACCTTCCTTTGTCACCCATACTGGAGGGTTTCGTCATCTTGAAAGAAAACCCAGATTATAGGGAGGAGCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_34503.p1 GENE.R_Transcript_34503~~R_Transcript_34503.p1 ORF type:complete len:895 (+),score=218.24,PC_rep|PF01851.18|0.0033,PC_rep|PF01851.18|0.00031,PC_rep|PF01851.18|0.00039,PC_rep|PF01851.18|0.35,PC_rep|PF01851.18|1.6e+02,PC_rep|PF01851.18|4.2e+03,PC_rep|PF01851.18|1.3e+02,PC_rep|PF01851.18|0.0033,PC_rep|PF01851.18|3.1e+02,HEAT_2|PF13646.2|2.1e+02,HEAT_2|PF13646.2|8.3e+03,HEAT_2|PF13646.2|1.8,HEAT_2|PF13646.2|1.3,HEAT_2|PF13646.2|0.003,HEAT_2|PF13646.2|0.0092 R_Transcript_34503:257-2941(+)
MDPEPSNTGAGAPPGGRKEATTKVPSKDPKKKDEKRDEDLSEEDLALKQQLELYVERVQDPDPGLQKVALESMRQEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMKDSDLKRFLADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAEEYAKRQNEEAPIYDLMDLVQQIVAFHMKHNAEPEAVDLLMEVEDLDLLVEHVDKTNYKRTCLYLTAAAKYLPGPDDMLVLDIAYTIYCKFEEYACALQVALFLDNMQYIKQIFTSCNDLLRKKQFCYILARHEVAFELDEEMVADDEDREQLQEIINNSKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGATVDSARQNLAATFVNAFVNAGFGQDKLMTISAETSTGASSGNWLFKNKEHGKTSAAASLGMILLWDVDTGLAQLDKYFHSTDAHVIAGALLGVGIVNCGIKNDCDPALALLGEYIDKDDASIRIGAIMGLGITYANTQNEQIRDRLTPVLGDTKASLDVIAFTAISLGLVYVGSCNEEVAQAIIFALMDRSESDLGEPLAKLLPLGLGLLYLGKQESVEATAEVSKTFNEKIRKHCDMTLLSCAYAGTGNVLKVQSLLGHCAQHLDKSETHQGPAVLGIAMIAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDSDSEVAMAAIISLGFIGAGTNNARIAGMLRNLSSYYYKDASALFCVRIAQGLVHMGKGLLTLNPYHSDRFLLSPVALAGLVTMLHACLDMKAIILGKYHYVLYFLVLAMQPRMLLTVDENLKPLSVPVRVGQAVDVVGQAGRPKTITGFQTHSTPVLLSAGDRAELATEKYLPLSPILEGFVILKENPDYREEH*

Click here to download the sequence:
Link to NCBI Protein BLAST