Transcript Information: R_Transcript_34522.p1


Annotated TAIR IDAT5G17520.1
Annotated Gene Nameroot cap 1 (RCP1)
Annotated Gene Symbol(s)RCP1, MEX1
Annotation TypeOrtholog
Chromosome Positionchr5:5772796-5775231 | Reverse length=415
E-Value4.9E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.064716788116
Replicate 28.1434249278165
Replicate 38.7773480508621
Condition 2: 8 Hour
Replicate 18.5242847596718
Replicate 29.2996190834837
Replicate 311.111499959209
Condition 3: 24 Hour
Replicate 110.942506248719
Replicate 29.9970098709626
Replicate 311.762084294361


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_34522.p1 GENE.R_Transcript_34522~~R_Transcript_34522.p1 ORF type:complete len:428 (+),score=84.94 R_Transcript_34522:115-1398(+)
ATGGTAGCAGCAGTAGCAGCACCAGCAGTGTCACAGTCTTTACTGCGGCCCTCCCGGTTTTCTCCATCTATTCCTTCTCCTGAAGCTTCTTCAAGGTTACAGCCTTCATCATTGGTTTCCTCCACTCGTCTGTTGAAGAACCAGAAGGGCTATTGCTTAGGTGGCGGTAGCAATGGTATTATATATCGTTTGATTGGTAACGGCCACTGCAGCAGCCTGCCCTCACTTCTCCATCAGCGCTTAAAGCCGCTTGCTGCCCTTGATTCTGATGTTCCCCAGCCTATTCAGCCGGGAGACGAAACAGCGACACTGAAAAATGACGATGATGTGTATAAGCAATGGGACCAGTGGACAGCAAAGTTTGCTGCAGGTGCCAATATTCCCTTTCTCCTCCTTCAGATGCCCCAAATATTGCTCAATGCTCGTAATCTAATGGCGGGGAATAAATCTGCACTTTTGGCTGTCAGTTGGCTGAGCATCCTCACTGGTTTGCTTGGGAACCTTTCGCTGCTCTCGTACTTTGCCAAGAAGAAGGAGACTGAAGCAATGATTGTGCAATGCCTGGGAGTGATTTCTTCATACACAGTGATCACACAGCTAGCAATGGCTGAGGCCATGCCTGCCTCTTACTTCCTTTTAACCTCTGCAGTGGTGGCCACTGGTTTTATTTCCAATTTACTCAATTATTTTGGCATGCTTCTTCCTGCTATCTGGCGTTTCTGGGAAGATTTCATCACCATTGGTGGACTTTCTATCCTTCCTCAGGTGATGTGGTCAACATTTGTTCCATATATTCCAAGCAGTCTGCTTCCTGGGGCAATAGCTTTTGTTGCAGCCATTATAGCAGTTGTCATGGCTAGAACGGGTAAACTCTCTGAAGGAGGTGTCAGATTTGTTGGAGCAATATCAGGGTGGACTGCTACACTTCTCTTCATGTGGATGCCAATTGCACAAATGTGGACAAACTTCCTCAATCCTGATAACATCAAAGGCTTATCAGCTATCTCAATGTTGCTTGCAATGATTGGAAATGGACTAATGATCCCACGTTCACTTTTCATCCGTGATTTGATGTGGTTCACTGGTTCAATGTGGGCGACTTTGATGTATGGCTGGGGGAATCTCATATGCCTGTATTTGTTTAAAAGCATCAGTCAGGAATTTTTCTTGGCATCCACAGCTGGTTTATTTTTCTGGATAGGGCTTACATTTTGGAAGGACAGCCGGGCCTACAGGCATGGATCACCTGTGAGATCTTTGAAGGAGCTTGTGTTTGGGTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_34522.p1 GENE.R_Transcript_34522~~R_Transcript_34522.p1 ORF type:complete len:428 (+),score=84.94 R_Transcript_34522:115-1398(+)
MVAAVAAPAVSQSLLRPSRFSPSIPSPEASSRLQPSSLVSSTRLLKNQKGYCLGGGSNGIIYRLIGNGHCSSLPSLLHQRLKPLAALDSDVPQPIQPGDETATLKNDDDVYKQWDQWTAKFAAGANIPFLLLQMPQILLNARNLMAGNKSALLAVSWLSILTGLLGNLSLLSYFAKKKETEAMIVQCLGVISSYTVITQLAMAEAMPASYFLLTSAVVATGFISNLLNYFGMLLPAIWRFWEDFITIGGLSILPQVMWSTFVPYIPSSLLPGAIAFVAAIIAVVMARTGKLSEGGVRFVGAISGWTATLLFMWMPIAQMWTNFLNPDNIKGLSAISMLLAMIGNGLMIPRSLFIRDLMWFTGSMWATLMYGWGNLICLYLFKSISQEFFLASTAGLFFWIGLTFWKDSRAYRHGSPVRSLKELVFGS*

Click here to download the sequence:
Link to NCBI Protein BLAST