Transcript Information: R_Transcript_345521.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8252960954719
Replicate 20.22101368859261
Replicate 30.84393243775298
Condition 2: 8 Hour
Replicate 11.9330946010983
Replicate 21.0591996661614
Replicate 31.4330218910832
Condition 3: 24 Hour
Replicate 11.3291362079197
Replicate 21.3929637194049
Replicate 31.1519844572051


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_345521.p2 GENE.R_Transcript_345521~~R_Transcript_345521.p2 ORF type:complete len:190 (+),score=25.70,RVT_1|PF00078.23|1.5e-29 R_Transcript_345521:4163-4732(+)
ATGTCGGTACGGCTAGGGGAAGTGTTGCCTTATACGGTTTCGTCCTCCCAGAATGCGTTTATTGATGGGCGCCAAATTTTAGATGTTTTGGTTGCGAATGAGGTGGTGGATGATGCGAGGAGGAGGGGAAGACTGGGTGTGGTGTTCAAACTGGACTTTGAAAAGGCTTATGATAGGGTCAGCTGGGATTTTCTGGATCAGCTGCTTATGCGGAAAGGGTTTGGCGAGCGCTGGAGGAAGTGGATCAGAGGGTGCTTTTCTAATGCCTTCTTCTCTTTGCTGGTGAATGGGGCTCCTAGCGATTGGTTTACGTCATCCCGAGGGCTACGTCAGGGGGATGCCTTGTCTCCTTTCCTATTTACTTTGGTGATGGATGTTTTGAGAATAATGCTGGACAGGGATGTGGATCGGGGTGTGTTTTCGGGCTTTCTAGTGGGCACGGACGCGGTGCAGGTGTCCCATCTTCAATATGCTGACGATACTATCCTTTTTCTCAATGCGGATTTGGAGCAGTTTCGACAGGTCCTTACTATTCTCCAACTGTTTAAATCTGTTTCGGGAAACTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_345521.p2 GENE.R_Transcript_345521~~R_Transcript_345521.p2 ORF type:complete len:190 (+),score=25.70,RVT_1|PF00078.23|1.5e-29 R_Transcript_345521:4163-4732(+)
MSVRLGEVLPYTVSSSQNAFIDGRQILDVLVANEVVDDARRRGRLGVVFKLDFEKAYDRVSWDFLDQLLMRKGFGERWRKWIRGCFSNAFFSLLVNGAPSDWFTSSRGLRQGDALSPFLFTLVMDVLRIMLDRDVDRGVFSGFLVGTDAVQVSHLQYADDTILFLNADLEQFRQVLTILQLFKSVSGNS*

Click here to download the sequence:
Link to NCBI Protein BLAST