Transcript Information: R_Transcript_34563.p1


Annotated TAIR IDAT5G48450.1
Annotated Gene NameSKU5 similar 3
Annotated Gene Symbol(s)sks3
Annotation TypeOrtholog
Chromosome Positionchr5:19632791-19635612 | Reverse length=621
E-Value2.5E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.135761847797
Replicate 24.6438876214871
Replicate 36.9528685880086
Condition 2: 8 Hour
Replicate 15.4733109882077
Replicate 27.3659375476847
Replicate 37.8585796568264
Condition 3: 24 Hour
Replicate 110.209471920085
Replicate 28.6664193758268
Replicate 311.278605473954


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_34563.p1 GENE.R_Transcript_34563~~R_Transcript_34563.p1 ORF type:complete len:425 (+),score=61.09,Cu-oxidase|PF00394.18|3e-42,Cu-oxidase_3|PF07732.11|9.2e-41,Cu-oxidase_3|PF07732.11|1.5e+02 R_Transcript_34563:649-1923(+)
ATGCACTGGATCAGTCAATCATATTCATGGGTAGTTTATTTATCAATATTAAACTTGGTGTTGTTGCTCAGATCCTGCTTTGCAGGTGACCCATATGTGTTCTTTGATTGGAGAGTCTCTTATGTCACTGCTGCCCCTCTTGGTGTCAAGCAACAGGTTATTGCTGTCAATGGGCAATTTCCAGGACCGATTCTCAATGTAACAACCAACTGGAATGTAGTTGTTAATGTCAGGAATAATCTTGACGAGCCATTGCTTTTAACTTGGTCTGGTGTACAACAAAGAAAAGATTCATGGCACGATGGTGTCTCGGGGACTAATTGCCCTATCCCTGCTGGCTGGAACTGGACATATGATTTTCAAGTTAAAGATCAGATAGGGAGTTTCTTTTACTTTCCTTCTCTGAGCTTTCAGAGAGCTGCTGGTGGGTATGGGGGAATAACTATAAACAACAGGGCCATAATTCCTATACCCTTTGGGACCCCAGATGGTGATATCACTCTTTTGATCAGCGATTGGTATACAAGGAGTCATAAGGAACTCAGAACAGATGTTGAAGACGGAAAGGACCTTGGTGTTCCTGATGGTGTGCTTTTCAATGGATTCGGTCCCTATCGGTATGACGCAGCTGTTGTTCCTGAAAACATCAATTACCTGTCGGTGAATGTTGAGCCAGGGAAGACTTATCGTATTCGGGTGTCGAATGTTGGTATCTCTACGAGCTTAAATTTCAGAATCCAGAATCACAATCTGATTCTAGTTGAGACTGAAGGCTCATATACAGCCCAGCAGAAATATACGGACATGGATATTCATGTTGGTCAATCCTACTCATTCTTAGTCACCATGGATCAGGATGCAAGAAGTGATTACTACATTGTTGCCAGCCCTCGGTTTGTCAATTCCTCTGCTTGGAGCAAAGCTACTGGTGTTGCTGTCTTGCACTACTCTAACTCTCAAGGGCCTGCTTCAGGTCCTCTTCCAGATCCTCCTAATGAGTTAGATCAATCTTACTCTATGACTCAAGCAACATCCATAAGGTGGAATCTGACTGCAAGTGGTGCTCGTCCAAATCCACAAGGATCTTTCAGATATGGAGAAATCACAGTTACAGATGTTTATGTGATTGTCAACCGGCCTGCAGAGCTTATAAATGGGAAGTCGCATACCACTCTCAATGGCATCTCTTACTTCACACCCTCAACACCTTTATACCTCGCACAGAAGTTTAAGGTACCGGGGTGTACAAGCTTGATTTTCCGAACAGGCCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_34563.p1 GENE.R_Transcript_34563~~R_Transcript_34563.p1 ORF type:complete len:425 (+),score=61.09,Cu-oxidase|PF00394.18|3e-42,Cu-oxidase_3|PF07732.11|9.2e-41,Cu-oxidase_3|PF07732.11|1.5e+02 R_Transcript_34563:649-1923(+)
MHWISQSYSWVVYLSILNLVLLLRSCFAGDPYVFFDWRVSYVTAAPLGVKQQVIAVNGQFPGPILNVTTNWNVVVNVRNNLDEPLLLTWSGVQQRKDSWHDGVSGTNCPIPAGWNWTYDFQVKDQIGSFFYFPSLSFQRAAGGYGGITINNRAIIPIPFGTPDGDITLLISDWYTRSHKELRTDVEDGKDLGVPDGVLFNGFGPYRYDAAVVPENINYLSVNVEPGKTYRIRVSNVGISTSLNFRIQNHNLILVETEGSYTAQQKYTDMDIHVGQSYSFLVTMDQDARSDYYIVASPRFVNSSAWSKATGVAVLHYSNSQGPASGPLPDPPNELDQSYSMTQATSIRWNLTASGARPNPQGSFRYGEITVTDVYVIVNRPAELINGKSHTTLNGISYFTPSTPLYLAQKFKVPGCTSLIFRTGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST