Transcript Information: R_Transcript_345934.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeHomolog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26377111206241
Replicate 20.60682949180052
Replicate 30.66204443919516
Condition 2: 8 Hour
Replicate 10.21230518740386
Replicate 20.25850730452238
Replicate 30.68199693082379
Condition 3: 24 Hour
Replicate 10.46446430807494
Replicate 20.63743522805137
Replicate 30.44281483470602


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_345934.p1 GENE.R_Transcript_345934~~R_Transcript_345934.p1 ORF type:complete len:346 (+),score=57.55,Skp1|PF01466.15|2e-28,Skp1_POZ|PF03931.11|7.1e-23 R_Transcript_345934:273-1310(+)
ATGGAAAAATGGAAAGTCATAAAGTGGGTTTCAATAGTGCTAAACTTGGTAAGTGAGTTATGCCAAGCTATACTAACTCAAGAGAATGGACAAGGCAAAATTGGCACCTCCTCTTACCTTAAGCTGAGCATGGTCACCTCTTCTTGTTGTTTCTTCCTATCCGTTGTTGAGATTATACACGAAGGTAAGGAATCAAGAGTACCATTAATGGGGAGACCAAGAAGGGATATATGTTGGCAAGGACAATTGTCAGGAAGATTTTTCTTGTATTTTGGCATAGTTAGCTCAACTATCCAGTTCATCATTGATTTGGTGGCATTATTGCGCAAAACAAATGTGGTGAAATTTGGTATAGTACCATTGGTGCTTTCAAGTGGGTATTTGGTTGCTGCCTTGGTTGATCCTGGAGAGAATTCCATGATCATGTTAAGAATTCATACAAGTTTCCCCTTCTTCGCCTTCAATATCTCAATTAGGAGGACTATTTCTTCGCTCTCTCAGCGCTCTCAAGGTCAAGGAGTTCAACAAGAGCTCGTACCCCAGCCTCAAGGAGAAGTAGAAGAAGAAGCACCTTTGATAATAAGGCCTAATATGGTGAAGCTCAAGAGCTCAGATGGGGAGATGTTTGAGGTGGAAGAAGCAGTGGCTATGCAGTCTGGGGTACTAAGAAGTAGGATCGAGGATGGTTGCCCTGACGATATCATCCCTCTTCCGAATGTTACCGGTCGAATACTTCTCAAGGTCATTGAATATTGTGAGAAGCACGCAAAGGAATTATCAGATGATCAGGAAGAGCTTAAGACATGGGATGCAGAGTTTGTGAAAGTTGACAAAAGTACCTTATTTGATCTGATAAATGCAGCCAACTACATGGAAATCGAAAGTCTTCTTGGCTTGACCATCCAGTTCGTAGCTCAGCAGATCGAAGGTAAAACACCTGAGGAGATCCGTCAGGTTTTCGGAGGCGCCCGTTTTACCGATATGACGGAGGAGGAGGAGGAAGAACTAAAGAGAGAGAATCCATGGGCTTTCGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_345934.p1 GENE.R_Transcript_345934~~R_Transcript_345934.p1 ORF type:complete len:346 (+),score=57.55,Skp1|PF01466.15|2e-28,Skp1_POZ|PF03931.11|7.1e-23 R_Transcript_345934:273-1310(+)
MEKWKVIKWVSIVLNLVSELCQAILTQENGQGKIGTSSYLKLSMVTSSCCFFLSVVEIIHEGKESRVPLMGRPRRDICWQGQLSGRFFLYFGIVSSTIQFIIDLVALLRKTNVVKFGIVPLVLSSGYLVAALVDPGENSMIMLRIHTSFPFFAFNISIRRTISSLSQRSQGQGVQQELVPQPQGEVEEEAPLIIRPNMVKLKSSDGEMFEVEEAVAMQSGVLRSRIEDGCPDDIIPLPNVTGRILLKVIEYCEKHAKELSDDQEELKTWDAEFVKVDKSTLFDLINAANYMEIESLLGLTIQFVAQQIEGKTPEEIRQVFGGARFTDMTEEEEEELKRENPWAFE*

Click here to download the sequence:
Link to NCBI Protein BLAST