Transcript Information: R_Transcript_345973.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value8E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18437334297696
Replicate 20
Replicate 30.15425412522662
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.30558267037689
Condition 3: 24 Hour
Replicate 10.15459802846939
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_345973.p1 GENE.R_Transcript_345973~~R_Transcript_345973.p1 ORF type:3prime_partial len:297 (+),score=23.10,RVT_1|PF00078.23|1e-38 R_Transcript_345973:339-1226(+)
ATGAAGAAAGAGCTATGCTTTTACTGCGACCTTTCACAGAGGATGAGGTCAGGGATGCATTCTTTACTATGGGCAAAAACAAATCCCCAGGGCCTGATGGGTATTCGGTGGAGTTTTTTTATTAAAAACTGGGAAACAGTAGGAGAGGAACTCACTAAGGCTGTTCTTCTTTTTTTTGAGCATGGTTATATTTTGAAGGAATGGAATAAAACCTTCATCACGCTTCTACCAAAGGTAGATCGCCCAACTGAGGTAACTCATTTTAGACCCATTGGTTTATGCAATGTGCTTTACAAGGGGATAGCTAAATGTTTGGTTAATCGGCTCAAGCTTATTTTGAATGATATTATATCCCCTAACCAAAATGCTTTTATTCCGGGGAGAATTTTGCAAGAAAATAGCTTGTTAGCCCATGAGTTACTGACGTATATTCAGGGAAGGAATGCAAAGCATAAGAGTCACTATATGGCGGTTAAATTGGACATGAATAAGGCTTACGACAGGATTAGTTGGACTTTTCTGGAGGCTGTAATGAGGCGCATGGGGTTTCCCGAGAGATGGATCCACTGGGTGATGCAATGTGTAACTACCGTTACTTACTCGATTTTGCTGAATGGAGAACTAACTACTTTTTTCAGACCAAATTGCGAAATTAGACAAGGGGATCCTTTATCTCCATATCTCTTCATCATTTGTATGGAGGCTTTGTCCAAAGCATTGTTAAAGGCACAAGGAAGGAGGACTATCCCAGGAATTAGAGTTGCGAGGGGGGCCCCTAACGTTAATCATCTTTTGTTTGTCGATGATATAATTCTGTTTACAAGAGCTTCGCCGCGATGTTGTTTCGAGATGAAGAAGGTGGTGGAAATCTTCTGCTCTGGTTCTGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_345973.p1 GENE.R_Transcript_345973~~R_Transcript_345973.p1 ORF type:3prime_partial len:297 (+),score=23.10,RVT_1|PF00078.23|1e-38 R_Transcript_345973:339-1226(+)
MKKELCFYCDLSQRMRSGMHSLLWAKTNPQGLMGIRWSFFIKNWETVGEELTKAVLLFFEHGYILKEWNKTFITLLPKVDRPTEVTHFRPIGLCNVLYKGIAKCLVNRLKLILNDIISPNQNAFIPGRILQENSLLAHELLTYIQGRNAKHKSHYMAVKLDMNKAYDRISWTFLEAVMRRMGFPERWIHWVMQCVTTVTYSILLNGELTTFFRPNCEIRQGDPLSPYLFIICMEALSKALLKAQGRRTIPGIRVARGAPNVNHLLFVDDIILFTRASPRCCFEMKKVVEIFCSGSG

Click here to download the sequence:
Link to NCBI Protein BLAST