Transcript Information: R_Transcript_34600.p1


Annotated TAIR IDAT3G47730.1
Annotated Gene NameATP-binding cassette A2
Annotated Gene Symbol(s)ATATH1, ATH1, ABCA2
Annotation TypeOrtholog
Chromosome Positionchr3:17594342-17598828 | Reverse length=983
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.253713480576
Replicate 213.412497376355
Replicate 320.022710778061
Condition 2: 8 Hour
Replicate 114.125488653777
Replicate 219.107131232716
Replicate 330.177755118105
Condition 3: 24 Hour
Replicate 125.824571597727
Replicate 219.18739240945
Replicate 323.626975337972


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_34600.p1 GENE.R_Transcript_34600~~R_Transcript_34600.p1 ORF type:complete len:969 (+),score=165.37,ABC_tran|PF00005.23|7.6e-23,ABC2_membrane_3|PF12698.3|4.5e-19,AAA_21|PF13304.2|0.25,AAA_21|PF13304.2|1.1e-09 R_Transcript_34600:527-3433(+)
ATGATGGAGTTAAAAAGGGGAATCCCATTACTAGTACAACAATTCAGATCACTAGTAGTGAAGAATGCATTACTATCATGGAGACACAAGTTGTCTACAATCCTTCAAGTCTTTTCTTCATTGGTTTTCATTTTCTTGATGTTTTGTATTCAAAAGGCAGTTGAAGCCCAGTCTAAAGGAACCACTTTTTTTGACAATATTTTGGATCCAAAACCTCTTGTTTCTCCTTCTATCCCACCTTGTGAAGACAAATTCTTCATCAAAAAGCCTTGTTTTGACTTTGTTTATAGTGGCAATTCTAGCAACAATGTTAATCGGATTGTTGCTCGCATTATGGATAACAATCCTGGCCGTCCAATTCCCTCTTCAAAGGTTAAGTCATTTGGGACTGAGGACGAGGTTGATGCATGGCTTCTTGGCAATCCAATGCATTGTCCAGGAGCTCTGCATTTCATTGAGGAAAATGCGACCGTAATGAGCTATGGCATTCAAACTAATTCTACATCAGTACCTATGAGAGGGAAGTATGAAGATACAACCTTCAAGTTTCAAATACCGCTTCAGGTTGCCGCAGAACGCGAGATAGCTAGGTTTCTTATTGGAGATGCGAATTTTGGCTGGACTGTTGGCTTCAAAGAATTTGCACATCCTCCCGCAGATCCGTTCAATGTAATCGGCACTATTGGCCCAACCTTTTTCTTTGCAATGGCCTTATTTGGTTTTGTGTTTCAAATGACTTCCCTGGTGATGGAGAAAGAACTAAAGCTTAGACAGGCAATGAGTATGATGGGTCTCTATGATACTGCCTACTGGCTATCTTGGATGACTTGGGAAGGTTTCCTTGTGGTTATTTCATCAATTTTCATTGTGCTGTTCGGGATGATGTTCCAGTTTGATTTTTTCTTGCACAATAGTTTCGCGATCTTGTTTCTTGTGTTTTTTCTTTTCCAACTGAACATGACTGCCTTTGCCTTTGCGTTGTCAGCCTTTGTCAACCAGTCAGCTTCATCCACAAGCATAGGATTCTACAGTTTCATTGTTGGATTAGTCACTCAGATTGTGACAGTGGCTGGGTTTCCATATAGTGACACGTTCTCTAAAACATACAGGGTCATATGGTCCTTGTTCCCTCCAAATCTGCTTGCCAAAGCTCTTCAGATGCTGACAGATGCCACTGCCACAAATCAAGATCCTGGACTTAGCTGGAAGGGGCGAACAAAATGTGCTCCCAATGATGATGATTGTGTGTTAACCATGAATGACGTCCTGATATGGTTCGTGGGAACATTCTTTATGTGGTATGTCTTGGCTATCTACTTTGAAAACATAATTCCAAACCCATATGGAGTAAGGAAATCAGTATTTTACTTTTTGAACCCTGGATATTGGACCGGGAAAGGCAAAACCAAGGCTCAAGAGGGTGGCATTTGTACCTGCTTTGGTTCATCCCCGCATCTTGAGCACATTACTCCAGAAGATGAGGATGTTCTGGAAGAGGAGAATACTGTAAAAGGGCAGGTCAATGAAGGTGCAGTTGATCCAAATGTTGCTGTTCAGATAGGCGGTCTTGCAAAGGTGTATCCAGGGTCAACCAATCTTGGTTGCTGTAAATGCAAGAGGACTCCGCCTTATCATGCTCTAAGGGGATTATGGGTAAATCTTGCTAAGAATCAACTATTTTGCCTTTTGGGACCCAATGGAGCAGGAAAAACTACTGCCATCAATTGTTTAACTGGCATTACGCCTGTGACCAGTGGAGATGCATTGATTTATGGGCATTCCGTCAGAAGCGCTGTTGGCATGTCAAACATTCGAAGAATGATAGGAGTGTGTCCGCAGTTTGATATCCTTTGGGACGTATTGACTGGCCAAGAGCACCTCCGCCTCTTTGCAAGCATAAAGGGTCTGCCAAATGCTACAATTTCAACATTTATTCATAATTCACTGGCTCAAGTGAGGTTGACTGATGCTGCCAAAATGAGAACTTCAAGTTACAGTGGTGGAATGAAACGACGTCTTAGTGTTGCAATTGCCCTTATTGGTGATCCGAAGCTAATCATTCTGGATGAACCTACAACAGGTATGGATCCTATTAGCAGGAGGCATGTGTGGGACATCATCGAAGATGCTAAACAAGGCAGGGCTATTATTCTAACCACACATTCGATGGAAGAAGCTGACATATTGAGTGACCGCATTGGAATCATGGCGAAAGGGAGGCTTCGATGCATTGGAACCTCAATCAGGTTGAAATCACGATTCGGAACTGGTTTTGTAGCCAATGTGAGCTTTGTTGGTAACGTAAATGGAACCCCTTCCAATGGAGATGCGATTGATACAAACTCCCAAGAAGCTCTGAAGCGTTTCTTCAAGCAACATTTGGATGTGGTGCCTAAGGAGGAGAGCAGAAGCTTCCTGACATTTGTTATTCCACATGAAAAAGAACCACTGTTAACAGGGTTTTTCGAAGAGCTACAAGAGAGAGAACGAGAATTTAGCATAGCCGACATCCAGCTTGGTCTCACCACTCTGGAAGAAGTTTTCCTAAATATTGCAAGACAGGCAGAGATGGAAAGTGCTGCTTCCGAAGGAAAACTGACCACTTTAAACTTAACAACTTCAGGAACCTCTGTTGAGATACCTACTGGAGCTCGTTACGTGGGGATACCAGGCACAGAATCTGCAGAAAATACTAGAGGTCTTATGGTTGAAGTGCACTGGGAACAAGATGATTCTGGTGCACTGTGCATTTCAGGTCATTCCCATGAAGTCCCGGTCCCAGCAAATGTTCAGCTACCGGCTGCACCACCTGTTGCCCCTGGTAGAGGTTTCTTAGGTAGGACAAAGAAGATTAATGGCCTTGTTATTGATCCTGATCAGATTCCTGACACACTTTTCCAAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_34600.p1 GENE.R_Transcript_34600~~R_Transcript_34600.p1 ORF type:complete len:969 (+),score=165.37,ABC_tran|PF00005.23|7.6e-23,ABC2_membrane_3|PF12698.3|4.5e-19,AAA_21|PF13304.2|0.25,AAA_21|PF13304.2|1.1e-09 R_Transcript_34600:527-3433(+)
MMELKRGIPLLVQQFRSLVVKNALLSWRHKLSTILQVFSSLVFIFLMFCIQKAVEAQSKGTTFFDNILDPKPLVSPSIPPCEDKFFIKKPCFDFVYSGNSSNNVNRIVARIMDNNPGRPIPSSKVKSFGTEDEVDAWLLGNPMHCPGALHFIEENATVMSYGIQTNSTSVPMRGKYEDTTFKFQIPLQVAAEREIARFLIGDANFGWTVGFKEFAHPPADPFNVIGTIGPTFFFAMALFGFVFQMTSLVMEKELKLRQAMSMMGLYDTAYWLSWMTWEGFLVVISSIFIVLFGMMFQFDFFLHNSFAILFLVFFLFQLNMTAFAFALSAFVNQSASSTSIGFYSFIVGLVTQIVTVAGFPYSDTFSKTYRVIWSLFPPNLLAKALQMLTDATATNQDPGLSWKGRTKCAPNDDDCVLTMNDVLIWFVGTFFMWYVLAIYFENIIPNPYGVRKSVFYFLNPGYWTGKGKTKAQEGGICTCFGSSPHLEHITPEDEDVLEEENTVKGQVNEGAVDPNVAVQIGGLAKVYPGSTNLGCCKCKRTPPYHALRGLWVNLAKNQLFCLLGPNGAGKTTAINCLTGITPVTSGDALIYGHSVRSAVGMSNIRRMIGVCPQFDILWDVLTGQEHLRLFASIKGLPNATISTFIHNSLAQVRLTDAAKMRTSSYSGGMKRRLSVAIALIGDPKLIILDEPTTGMDPISRRHVWDIIEDAKQGRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVANVSFVGNVNGTPSNGDAIDTNSQEALKRFFKQHLDVVPKEESRSFLTFVIPHEKEPLLTGFFEELQEREREFSIADIQLGLTTLEEVFLNIARQAEMESAASEGKLTTLNLTTSGTSVEIPTGARYVGIPGTESAENTRGLMVEVHWEQDDSGALCISGHSHEVPVPANVQLPAAPPVAPGRGFLGRTKKINGLVIDPDQIPDTLFQR*

Click here to download the sequence:
Link to NCBI Protein BLAST