Transcript Information: R_Transcript_34602.p1


Annotated TAIR IDAT3G47730.1
Annotated Gene NameATP-binding cassette A2
Annotated Gene Symbol(s)ATATH1, ATH1, ABCA2
Annotation TypeOrtholog
Chromosome Positionchr3:17594342-17598828 | Reverse length=983
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0639916938429
Replicate 22.7854388491973
Replicate 30.78274279223034
Condition 2: 8 Hour
Replicate 10.61522273736797
Replicate 22.0225923273434
Replicate 32.2438674435252
Condition 3: 24 Hour
Replicate 10.36917076949072
Replicate 20.90880966282781
Replicate 31.2758662028543


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_34602.p1 GENE.R_Transcript_34602~~R_Transcript_34602.p1 ORF type:complete len:995 (+),score=165.54,ABC_tran|PF00005.23|4.8e-22,ABC2_membrane_3|PF12698.3|2.9e-19,AAA_21|PF13304.2|0.25,AAA_21|PF13304.2|3.7,AAA_21|PF13304.2|2.9 R_Transcript_34602:527-3511(+)
ATGATGGAGTTAAAAAGGGGAATCCCATTACTAGTACAACAATTCAGATCACTAGTAGTGAAGAATGCATTACTATCATGGAGACACAAGTTGTCTACAATCCTTCAAGTCTTTTCTTCATTGGTTTTCATTTTCTTGATGTTTTGTATTCAAAAGGCAGTTGAAGCCCAGTCTAAAGGAACCACTTTTTTTGACAATATTTTGGATCCAAAACCTCTTGTTTCTCCTTCTATCCCACCTTGTGAAGACAAATTCTTCATCAAAAAGCCTTGTTTTGACTTTGTTTATAGTGGCAATTCTAGCAACAATGTTAATCGGATTGTTGCTCGCATTATGGATAACAATCCTGGCCGTCCAATTCCCTCTTCAAAGGTTAAGTCATTTGGGACTGAGGACGAGGTTGATGCATGGCTTCTTGGCAATCCAATGCATTGTCCAGGAGCTCTGCATTTCATTGAGGAAAATGCGACCGTAATGAGCTATGGCATTCAAACTAATTCTACATCAGTACCTATGAGAGGGAAGTATGAAGATACAACCTTCAAGTTTCAAATACCGCTTCAGGTTGCCGCAGAACGCGAGATAGCTAGGTTTCTTATTGGAGATGCGAATTTTGGCTGGACTGTTGGCTTCAAAGAATTTGCACATCCTCCCGCAGATCCGTTCAATGTAATCGGCACTATTGGCCCAACCTTTTTCTTTGCAATGGCCTTATTTGGTTTTGTGTTTCAAATGACTTCCCTGGTGATGGAGAAAGAACTAAAGCTTAGACAGGCAATGAGTATGATGGGTCTCTATGATACTGCCTACTGGCTATCTTGGATGACTTGGGAAGGTTTCCTTGTGGTTATTTCATCAATTTTCATTGTGCTGTTCGGGATGATGTTCCAGTTTGATTTTTTCTTGCACAATAGTTTCGCGATCTTGTTTCTTGTGTTTTTTCTTTTCCAACTGAACATGACTGCCTTTGCCTTTGCGTTGTCAGCCTTTGTCAACCAGTCAGCTTCATCCACAAGCATAGGATTCTACAGTTTCATTGTTGGATTAGTCACTCAGATTGTGACAGTGGCTGGGTTTCCATATAGTGACACGTTCTCTAAAACATACAGGGTCATATGGTCCTTGTTCCCTCCAAATCTGCTTGCCAAAGCTCTTCAGATGCTGACAGATGCCACTGCCACAAATCAAGATCCTGGACTTAGCTGGAAGGGGCGAACAAAATGTGCTCCCAATGATGATGATTGTGTGTTAACCATGAATGACGTCCTGATATGGTTCGTGGGAACATTCTTTATGTGGTATGTCTTGGCTATCTACTTTGAAAACATAATTCCAAACCCATATGGAGTAAGGAAATCAGTATTTTACTTTTTGAACCCTGGATATTGGACCGGGAAAGGCAAAACCAAGGCTCAAGAGGGTGGCATTTGTACCTGCTTTGGTTCATCCCCGCATCTTGAGCACATTACTCCAGAAGATGAGGATGTTCTGGAAGAGGAGAATACTGTAAAAGGGCAGGTCAATGAAGGTGCAGTTGATCCAAATGTTGCTGTTCAGATAGGCGGTCTTGCAAAGGTGTATCCAGGGTCAACCAATCTTGGTTGCTGTAAATGCAAGAGGACTCCGCCTTATCATGCTCTAAGGGGATTATGGGTAAATCTTGCTAAGAATCAACTATTTTGCCTTTTGGGACCCAATGGAGCAGGAAAAACTACTGCCATCAATTGTTTAACTGGCATTACGCCTGTGACCAGTGGAGATGCATTGATTTATGGGCATTCCGTCAGAAGCGCTGTTGGCATGTCAAACATTCGAAGAATGATAGGAGTGTGTCCGCAGTTTGATATCCTTTGGGACGTATTGACTGGCCAAGAGCACCTCCGCCTCTTTGCAAGCATAAAGGGTCTGCCAAATGCTACAATTTCAACATTTATTCATAATTCACTGGCTCAAGTGAGGTTGACTGATGCTGCCAAAATGAGAACTTCAAGTTACAGTGGTGGAATGAAACGACGTCTTAGTGTTGCAATTGCCCTTATTGGTGATCCGAAGCTAATCATTCTGGATGAACCTGTATGTATGAATTCATATAAAATTTTTCCATTCAATCTATGGAGCCATATGCCTTTAAGAGTTCTGTTGGAATTGCAGACAACAGGTATGGATCCTATTAGCAGGAGGCATGTGTGGGACATCATCGAAGATGCTAAACAAGGCAGGGCTATTATTCTAACCACACATTCGATGGAAGAAGCTGACATATTGAGTGACCGCATTGGAATCATGGCGAAAGGGAGGCTTCGATGCATTGGAACCTCAATCAGGTTGAAATCACGATTCGGAACTGGTTTTGTAGCCAATGTGAGCTTTGTTGGTAACGTAAATGGAACCCCTTCCAATGGAGATGCGATTGATACAAACTCCCAAGAAGCTCTGAAGCGTTTCTTCAAGCAACATTTGGATGTGGTGCCTAAGGAGGAGAGCAGAAGCTTCCTGACATTTGTTATTCCACATGAAAAAGAACCACTGTTAACAGGGTTTTTCGAAGAGCTACAAGAGAGAGAACGAGAATTTAGCATAGCCGACATCCAGCTTGGTCTCACCACTCTGGAAGAAGTTTTCCTAAATATTGCAAGACAGGCAGAGATGGAAAGTGCTGCTTCCGAAGGAAAACTGACCACTTTAAACTTAACAACTTCAGGAACCTCTGTTGAGATACCTACTGGAGCTCGTTACGTGGGGATACCAGGCACAGAATCTGCAGAAAATACTAGAGGTCTTATGGTTGAAGTGCACTGGGAACAAGATGATTCTGGTGCACTGTGCATTTCAGGTCATTCCCATGAAGTCCCGGTCCCAGCAAATGTTCAGCTACCGGCTGCACCACCTGTTGCCCCTGGTAGAGGTTTCTTAGGTAGGACAAAGAAGATTAATGGCCTTGTTATTGATCCTGATCAGATTCCTGACACACTTTTCCAAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_34602.p1 GENE.R_Transcript_34602~~R_Transcript_34602.p1 ORF type:complete len:995 (+),score=165.54,ABC_tran|PF00005.23|4.8e-22,ABC2_membrane_3|PF12698.3|2.9e-19,AAA_21|PF13304.2|0.25,AAA_21|PF13304.2|3.7,AAA_21|PF13304.2|2.9 R_Transcript_34602:527-3511(+)
MMELKRGIPLLVQQFRSLVVKNALLSWRHKLSTILQVFSSLVFIFLMFCIQKAVEAQSKGTTFFDNILDPKPLVSPSIPPCEDKFFIKKPCFDFVYSGNSSNNVNRIVARIMDNNPGRPIPSSKVKSFGTEDEVDAWLLGNPMHCPGALHFIEENATVMSYGIQTNSTSVPMRGKYEDTTFKFQIPLQVAAEREIARFLIGDANFGWTVGFKEFAHPPADPFNVIGTIGPTFFFAMALFGFVFQMTSLVMEKELKLRQAMSMMGLYDTAYWLSWMTWEGFLVVISSIFIVLFGMMFQFDFFLHNSFAILFLVFFLFQLNMTAFAFALSAFVNQSASSTSIGFYSFIVGLVTQIVTVAGFPYSDTFSKTYRVIWSLFPPNLLAKALQMLTDATATNQDPGLSWKGRTKCAPNDDDCVLTMNDVLIWFVGTFFMWYVLAIYFENIIPNPYGVRKSVFYFLNPGYWTGKGKTKAQEGGICTCFGSSPHLEHITPEDEDVLEEENTVKGQVNEGAVDPNVAVQIGGLAKVYPGSTNLGCCKCKRTPPYHALRGLWVNLAKNQLFCLLGPNGAGKTTAINCLTGITPVTSGDALIYGHSVRSAVGMSNIRRMIGVCPQFDILWDVLTGQEHLRLFASIKGLPNATISTFIHNSLAQVRLTDAAKMRTSSYSGGMKRRLSVAIALIGDPKLIILDEPVCMNSYKIFPFNLWSHMPLRVLLELQTTGMDPISRRHVWDIIEDAKQGRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVANVSFVGNVNGTPSNGDAIDTNSQEALKRFFKQHLDVVPKEESRSFLTFVIPHEKEPLLTGFFEELQEREREFSIADIQLGLTTLEEVFLNIARQAEMESAASEGKLTTLNLTTSGTSVEIPTGARYVGIPGTESAENTRGLMVEVHWEQDDSGALCISGHSHEVPVPANVQLPAAPPVAPGRGFLGRTKKINGLVIDPDQIPDTLFQR*

Click here to download the sequence:
Link to NCBI Protein BLAST