Transcript Information: R_Transcript_346197.p1


Annotated TAIR IDAT1G05860.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31600.1); Has 101 Blast hits to 100 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:1769061-1770349 | Forward length=280
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35101847989844
Replicate 20
Replicate 30.2202570922707
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.17453471750372
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_346197.p1 GENE.R_Transcript_346197~~R_Transcript_346197.p1 ORF type:5prime_partial len:104 (+),score=-0.81,zf-C3Hc3H|PF13891.2|4.2e-09 R_Transcript_346197:3-314(+)
AAGTCGAAGGCTATGGCTTTGACGAGTTTTTGTCATTTGCATATAGTTCATGATCCTAATCAGAAGCTTTACAAGGCTTGCAACTTCGTTATCAAGAGGTTCTTTTATCCCTTTTCCTCTTTTCTAATTATATATGTTTATTTATTTTGGTTTTCTGGATGTGTTTTTGTTTTAATTATTAGTCCTGTTTCTTTTTATTTTGTTAATTTTCCGAGTGTAATTGTGATAACTTGCTCAAGAAGTTGGACTTGTGCGACCAATTCAATGCTTGATAGGAAAAATATCCTTTTAGTCACCTGGGGTTTAGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_346197.p1 GENE.R_Transcript_346197~~R_Transcript_346197.p1 ORF type:5prime_partial len:104 (+),score=-0.81,zf-C3Hc3H|PF13891.2|4.2e-09 R_Transcript_346197:3-314(+)
KSKAMALTSFCHLHIVHDPNQKLYKACNFVIKRFFYPFSSFLIIYVYLFWFSGCVFVLIISPVSFYFVNFPSVIVITCSRSWTCATNSMLDRKNILLVTWGLV*

Click here to download the sequence:
Link to NCBI Protein BLAST