Transcript Information: R_Transcript_346403.p2


Annotated TAIR IDAT1G42470.1
Annotated Gene NamePatched family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:15926987-15935128 | Forward length=1272
E-Value8.6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2404924920683
Replicate 20.20384757685726
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.65128782061706
Replicate 30.35245845864829
Condition 3: 24 Hour
Replicate 11.114456661539
Replicate 20.42825745418597
Replicate 30.85000794900572


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_346403.p2 GENE.R_Transcript_346403~~R_Transcript_346403.p2 ORF type:5prime_partial len:103 (+),score=11.64 R_Transcript_346403:3-311(+)
CAAGTTGTTGTCCTTGCTCTATTTGCTGGATTGAGAAATATTTATTCAAGTGCTGTTTTTATTGTCTGCCTAATTATAACATCAAGTTTCTGGAGTTCAGCTATCATTCTGCTTGTTCTAGCAATGATTGTGGTGGATCTAATGGTATATTCTGAAGTTTCAGCTACTAGAAATTTAACACTTTTCTCTTGCATAAACAATGACACGTCTCTGGTCTCTGCCTATGATCAATGGCATTGCAATCAAGTCATTTTTGTTTCCATTGAAAACTTAAGAGACAAGAAACACTTTGGTGCTAAATGTGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_346403.p2 GENE.R_Transcript_346403~~R_Transcript_346403.p2 ORF type:5prime_partial len:103 (+),score=11.64 R_Transcript_346403:3-311(+)
QVVVLALFAGLRNIYSSAVFIVCLIITSSFWSSAIILLVLAMIVVDLMVYSEVSATRNLTLFSCINNDTSLVSAYDQWHCNQVIFVSIENLRDKKHFGAKCV*

Click here to download the sequence:
Link to NCBI Protein BLAST