Transcript Information: R_Transcript_346885.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3174427992125
Replicate 20.18257652535911
Replicate 30.19918902257524
Condition 2: 8 Hour
Replicate 10.21292056475865
Replicate 20.38888490158584
Replicate 30
Condition 3: 24 Hour
Replicate 10.39926621265572
Replicate 20
Replicate 30.57098360052776


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_346885.p1 GENE.R_Transcript_346885~~R_Transcript_346885.p1 ORF type:5prime_partial len:115 (+),score=10.56,PIF1|PF05970.10|7.4e-24 R_Transcript_346885:3-347(+)
TCGGTGTACCCAGAGATCAATCAGTTAGCAGCTAATCCTCATGCCTTCACTGCACGAGCAACATTAACTCCAACAAATGATGAAGTTGATTGTATCAACAAGCTTGTAATACACAAATTCCCAGGAGAATCATATATTTTCAAAAGCTATGACAACACCATAGATGATGATTGTAATGCTCATTCGGTTGAATTTCTCAACACACTATGTCCAGGAGGGATGAGTCCCCACAATCTAATACCAAAGCTTAATTGTGCAGTCATTTTGCTTCGAAATCTGAACCCATCTATTGGGTTATGTAATGGGACAAGGCTCATTTGTAGAGGATTAAATGCAATGTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_346885.p1 GENE.R_Transcript_346885~~R_Transcript_346885.p1 ORF type:5prime_partial len:115 (+),score=10.56,PIF1|PF05970.10|7.4e-24 R_Transcript_346885:3-347(+)
SVYPEINQLAANPHAFTARATLTPTNDEVDCINKLVIHKFPGESYIFKSYDNTIDDDCNAHSVEFLNTLCPGGMSPHNLIPKLNCAVILLRNLNPSIGLCNGTRLICRGLNAML*

Click here to download the sequence:
Link to NCBI Protein BLAST