Transcript Information: R_Transcript_347575.p2


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value6E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21474071711434
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.14403449968968
Replicate 20.2630691981316
Replicate 30.21354836023985
Condition 3: 24 Hour
Replicate 10.13504592486885
Replicate 20
Replicate 30.12875120404057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_347575.p2 GENE.R_Transcript_347575~~R_Transcript_347575.p2 ORF type:5prime_partial len:170 (+),score=30.13,RVT_1|PF00078.23|5e-20 R_Transcript_347575:1-510(+)
GTTGTGGGAGGGGATATCTGCAAGTCCATACAGCAATTCTTTGAAAATGGGAAGATGTTAAGGTCAGTCAACTGCACTGCTATATCTCTCATTGCAAAAGTGGAAAATCCTAATGTTCCTGCTGATTTTAGACCAATTTCTTGTTGTAATGTGGTTTATAAAACTATTACTAAGCTGATTACTGAGAAACTTAAGCTGGTGGTTGGAGATTTGATAGGCAGTGAGCAAGCAGCTTTTATCACTGGTAGGTCTATTCATAGCAATGTCCTACTAATTCACAATCTGGTTTATGCTTATGGGGGGAAGAATATATCACCACGAGCCATGATTAAAATAGATGTGAGGAAAGCCTATGATACAGTGTCTTGGCAGTTTTTGAAATCAGCACTTGATTACTTTGGCTTCCCTAAGGTTTTTGTGGCAAGAATTATGTGCTGCCTGCAAATAGCTCAGTTCTTAGTAAACATTAATGGAAGTCTGAGGGGTTTTTTAAGGGAGAATGTGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_347575.p2 GENE.R_Transcript_347575~~R_Transcript_347575.p2 ORF type:5prime_partial len:170 (+),score=30.13,RVT_1|PF00078.23|5e-20 R_Transcript_347575:1-510(+)
VVGGDICKSIQQFFENGKMLRSVNCTAISLIAKVENPNVPADFRPISCCNVVYKTITKLITEKLKLVVGDLIGSEQAAFITGRSIHSNVLLIHNLVYAYGGKNISPRAMIKIDVRKAYDTVSWQFLKSALDYFGFPKVFVARIMCCLQIAQFLVNINGSLRGFLRENVD*

Click here to download the sequence:
Link to NCBI Protein BLAST