Transcript Information: R_Transcript_348377.p2


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeHomolog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value4E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1871844523394
Replicate 20.34140325880159
Replicate 30.37246727798622
Condition 2: 8 Hour
Replicate 10
Replicate 20.18179578732671
Replicate 30.59029628033779
Condition 3: 24 Hour
Replicate 10.18664883924963
Replicate 20.17931104789087
Replicate 30.53384645577798


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_348377.p2 GENE.R_Transcript_348377~~R_Transcript_348377.p2 ORF type:3prime_partial len:123 (+),score=15.48 R_Transcript_348377:443-808(+)
ATGTCACAAGTCAATATACAGCTTACTGAACTAATGAATAACAAGCCAGCAAGAGTTGTAAGTGTCAGTTTTGAGGACCGGTATTCAGAGGGCTCGACGAGTTCTGAGCACCCACTGTATCCTACAAAGAAGCTGGTTCCTGAGAGAAGAGCATTATTTGACATGGCCTTGGATGTTATTCGAAGAGGCTTTCAGAGAAGTTCACGAGGGATCAGAAGCTTGAGGGCGTCACTGAGCTTACAATCATTCTATGATCAACCACTGAGCAAGCCAGGTCACCTGAGAAAAATTCTTGATCCCCAGGGACCATTTCTTCAGAAATGGAACAAGATATTTCTAATCTCATGTGTGTTTGCTCTAGCATGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_348377.p2 GENE.R_Transcript_348377~~R_Transcript_348377.p2 ORF type:3prime_partial len:123 (+),score=15.48 R_Transcript_348377:443-808(+)
MSQVNIQLTELMNNKPARVVSVSFEDRYSEGSTSSEHPLYPTKKLVPERRALFDMALDVIRRGFQRSSRGIRSLRASLSLQSFYDQPLSKPGHLRKILDPQGPFLQKWNKIFLISCVFALAW

Click here to download the sequence:
Link to NCBI Protein BLAST