Transcript Information: R_Transcript_349286.p1


Annotated TAIR IDAT5G24350.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8301537-8310746 | Forward length=2396
E-Value8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.352071181831
Replicate 20.90724754885239
Replicate 30.84839768874639
Condition 2: 8 Hour
Replicate 10.4534419434675
Replicate 22.070452022332
Replicate 31.5686577079347
Condition 3: 24 Hour
Replicate 10.85028915658163
Replicate 21.6337228807835
Replicate 31.8915300346701


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_349286.p1 GENE.R_Transcript_349286~~R_Transcript_349286.p1 ORF type:complete len:162 (+),score=26.34 R_Transcript_349286:161-646(+)
ATGCAGCAGTACTTCACTAGAATTGTTCCCTCGCATGTCTACAGTGGCGGTATACCCAATGATCCAACATGGAAAGACTGTCTTATTGTGCTTCTCAACTTTTGGACAAAATTGAATGATGATTTGCTGGAACTTGCCGAGAGCTCCGAAGAGAAGTTCAACACAGCTTGTTTAATGGTTTCCCTCAAAGTTTTCTTGAGGTTAGTTGTGGATGGAAAAGTTACACCGAGTCAGGGATGGCGCAGTCTTTATCACTATGCTAATTATGGCTTAGTAATTAATTGTCCTGCTGAAGATTTATATTTCTGTAGGGCCATGGTCATATCTAGATGTGGGTTTAGTGCAGTGGAGACATTATTCTCTGAAGCAATTTCACAATGCTTAACTGATGAAATTGTGAGCTCTGGCACCAAGGGTGGGATTAATCTTTTCCATGATGTTTGTGACTTGTACTCGAATCTACTGGAAAATATTTTGTCAAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_349286.p1 GENE.R_Transcript_349286~~R_Transcript_349286.p1 ORF type:complete len:162 (+),score=26.34 R_Transcript_349286:161-646(+)
MQQYFTRIVPSHVYSGGIPNDPTWKDCLIVLLNFWTKLNDDLLELAESSEEKFNTACLMVSLKVFLRLVVDGKVTPSQGWRSLYHYANYGLVINCPAEDLYFCRAMVISRCGFSAVETLFSEAISQCLTDEIVSSGTKGGINLFHDVCDLYSNLLENILSN*

Click here to download the sequence:
Link to NCBI Protein BLAST