Transcript Information: R_Transcript_349513.p1


Annotated TAIR IDAT5G03340.1
Annotated Gene NameATPase, AAA-type, CDC48 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:810091-813133 | Reverse length=810
E-Value1.3E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.37862376191988
Condition 2: 8 Hour
Replicate 10.40472504045033
Replicate 20
Replicate 30.30002662182458
Condition 3: 24 Hour
Replicate 10
Replicate 20.18227486686427
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_349513.p1 GENE.R_Transcript_349513~~R_Transcript_349513.p1 ORF type:internal len:121 (+),score=41.61 R_Transcript_349513:2-361(+)
TACATTCCTCTCCCTGATGAGAGTTCTCGTCTTCAGATTTTCAAGGCCTGTTTGCGGAAATCCCCTGTCTCTAAGGATGTTAATCTCGCTGCTCTTGCTCAGTACACTAATGGTTTCAGTGGTGCTGATATCACTGAAATCTGCCAACGTGCCTGCAAGTATGCCATCCGGGAAAACATTGAAAAGGATCTCGAGAAGGAAAGGAAAAGGAGTGAAAACACAGACAGCATGGAGGAAGATGTGGAGGAAGAAGAGGTGGCGGAGATCAAGGCAGCACACTTTGAGGAGTCAATGAAGTTTGCTCGACGAAGTGTTGGAGATGCTGACATTCGGAAATATCAGAGCTTTGCTCAGACATTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_349513.p1 GENE.R_Transcript_349513~~R_Transcript_349513.p1 ORF type:internal len:121 (+),score=41.61 R_Transcript_349513:2-361(+)
YIPLPDESSRLQIFKACLRKSPVSKDVNLAALAQYTNGFSGADITEICQRACKYAIRENIEKDLEKERKRSENTDSMEEDVEEEEVAEIKAAHFEESMKFARRSVGDADIRKYQSFAQTL

Click here to download the sequence:
Link to NCBI Protein BLAST