Transcript Information: R_Transcript_349725.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21991519222553
Replicate 20.25296747489516
Replicate 30
Condition 2: 8 Hour
Replicate 10.59002084210229
Replicate 20.26940821495404
Replicate 30
Condition 3: 24 Hour
Replicate 10.55320017416154
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_349725.p1 GENE.R_Transcript_349725~~R_Transcript_349725.p1 ORF type:5prime_partial len:83 (+),score=9.11,gag_pre-integrs|PF13976.2|7.4e-06 R_Transcript_349725:2-250(+)
CATGTGTCTGGCCATATGAGTGAAAAGGGAATGACTGTTCTAAGCAAGAGAGGTCTCCTTGGTGATAAAGGCACTAGTAAGCTCAATTTCTGTGAGCATTGTGTGTTTGGGAGACAAAAGAAGGTCAGTTTCTCTAAAGCCATTCATCGCACTAAAGTTATCCTTGATTACATGCATTCTGATTTATGGGGAACATTGATGAGTCAATATTTATACATATTTACCCCCTGTACTTGTAGTAGTTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_349725.p1 GENE.R_Transcript_349725~~R_Transcript_349725.p1 ORF type:5prime_partial len:83 (+),score=9.11,gag_pre-integrs|PF13976.2|7.4e-06 R_Transcript_349725:2-250(+)
HVSGHMSEKGMTVLSKRGLLGDKGTSKLNFCEHCVFGRQKKVSFSKAIHRTKVILDYMHSDLWGTLMSQYLYIFTPCTCSSF*

Click here to download the sequence:
Link to NCBI Protein BLAST