Transcript Information: R_Transcript_3498.p1


Annotated TAIR IDAT5G62740.1
Annotated Gene NameSPFH/Band 7/PHB domain-containing membrane-associated protein family
Annotated Gene Symbol(s)HIR1, ATHIR1
Annotation TypeOrtholog
Chromosome Positionchr5:25201320-25202535 | Forward length=286
E-Value8.7E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1101.97574366716
Replicate 290.182026440836
Replicate 389.55898101829
Condition 2: 8 Hour
Replicate 1125.74511894783
Replicate 2188.20408882998
Replicate 3161.1585706817
Condition 3: 24 Hour
Replicate 178.837747736803
Replicate 265.553130591438
Replicate 386.258836179266


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3498.p1 GENE.R_Transcript_3498~~R_Transcript_3498.p1 ORF type:complete len:288 (+),score=89.65,Band_7|PF01145.21|2.2e-25 R_Transcript_3498:1245-2108(+)
ATGGGACAAGCTCTTGGCTGCATTCAAGTGGGTCAGTCAACTGTGGCTATTGCAGAAAGATTTGGAAAATTTGATGATGTGCTTGAGCCTGGATGTCACTGTCTGCCATGGTGCCTTGGGGCCCAGTTAGCTGGCCAGCTCTCCTTGCGTGTGCAGCAACTTGATGTTCGTTGTGAAACCAAAACTAAGGATAATGTGTTCGTCACTGTGGTTGCATCTGTGCAATACCGAGCATTGTCAGAGAAAGCCTCGGATGCTTTCTATAGGCTAAGCAACACCAGGGAACAAATCCAAGCATATGTCTTTGATGTTATCCATGCAAGTGTTCCCAAATTGATCCTTGATTCTGCATTTGAGCAGAAGAATGATATTGCAAAAGCTGTTGAAGAGGAGCTTGAAAAGGCTATGTCAGCTTATGGGTATGAGATAGTTCAAACTCTCATTGTGGACATAGAACCTGATGTGAATGTGAAGAGAGCAATGAATGAGATCAATGCAGCTGCCAGAATGAGATTGGCTGCAAATGAGAAGGCCGAAGCGGACAAGATACTGCAAATAAAGAAAGCCGAGGGGGAGGCTGAATCCAAGTACCTTGCTGGGCTTGGTATAGCTCGGCAGCGCCAGGCTATCGTTGATGGACTTAGAGACAGTGTGCTGAACTTCTCTGAGAATGTGCCCGGCACAACCGCCAAGGATATCATGGACATGGTTCTGGTTACCCAGTACTTTGATACAATGAGAGAGATAGGTGCATCATCAAAGTCATCTTCTGTGTTCATCCCTCATGGCCCAGGTGCTGTTAAGGACATTGCCAGTCAAATTAGGGATGGTCTTCTCCAGGGAAGTGTGGTGCAGCAGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3498.p1 GENE.R_Transcript_3498~~R_Transcript_3498.p1 ORF type:complete len:288 (+),score=89.65,Band_7|PF01145.21|2.2e-25 R_Transcript_3498:1245-2108(+)
MGQALGCIQVGQSTVAIAERFGKFDDVLEPGCHCLPWCLGAQLAGQLSLRVQQLDVRCETKTKDNVFVTVVASVQYRALSEKASDAFYRLSNTREQIQAYVFDVIHASVPKLILDSAFEQKNDIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDVNVKRAMNEINAAARMRLAANEKAEADKILQIKKAEGEAESKYLAGLGIARQRQAIVDGLRDSVLNFSENVPGTTAKDIMDMVLVTQYFDTMREIGASSKSSSVFIPHGPGAVKDIASQIRDGLLQGSVVQQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST