Transcript Information: R_Transcript_349826.p1


Annotated TAIR IDAT5G66560.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26564368-26566662 | Forward length=668
E-Value5.8E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4666163452323
Replicate 20.94577929803144
Replicate 31.0318350268537
Condition 2: 8 Hour
Replicate 10.66178013370933
Replicate 21.0072469297831
Replicate 30.65411209442836
Condition 3: 24 Hour
Replicate 11.8614438292733
Replicate 20.99348013020618
Replicate 30.78874611484315


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_349826.p1 GENE.R_Transcript_349826~~R_Transcript_349826.p1 ORF type:5prime_partial len:111 (-),score=8.97,NPH3|PF03000.10|1e-30 R_Transcript_349826:15-347(-)
CTCCTGATTCCGAGCTACTCATATTTGAACGAGACGCTGTATGACGTTGATTGTATTCAGAGGATTCTAGGTCATTTTCTGGATAGATACGAGGAAAGAGAAATCGAAGTTGCCGGAGGTGATCAGAGCATTGCAAGTGTCAGATCTCCGGCGATTATGCTTGTTGGAAAACTCATCGACGGTTACTTATCGGAGATTGCGTCTGATGCGAACTTAAAGGCTGATAAATTCTACGAACTTGCAATGTCTCTTCCTGAACAAGCCAGATTATACGACGATGGCGTCTACAGAGCTGTTGATGTCTATCTCAAGGTAATTCCTTTTGTTTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_349826.p1 GENE.R_Transcript_349826~~R_Transcript_349826.p1 ORF type:5prime_partial len:111 (-),score=8.97,NPH3|PF03000.10|1e-30 R_Transcript_349826:15-347(-)
LLIPSYSYLNETLYDVDCIQRILGHFLDRYEEREIEVAGGDQSIASVRSPAIMLVGKLIDGYLSEIASDANLKADKFYELAMSLPEQARLYDDGVYRAVDVYLKVIPFVY*

Click here to download the sequence:
Link to NCBI Protein BLAST