Transcript Information: R_Transcript_35019.p1


Annotated TAIR IDAT1G76120.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28558813-28560294 | Reverse length=463
E-Value4.6E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.935738885429
Replicate 210.845045606331
Replicate 312.827773053845
Condition 2: 8 Hour
Replicate 110.518275899077
Replicate 210.188784421549
Replicate 311.617030797048
Condition 3: 24 Hour
Replicate 116.729254310275
Replicate 214.767434213691
Replicate 316.634655562042


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35019.p1 GENE.R_Transcript_35019~~R_Transcript_35019.p1 ORF type:complete len:575 (+),score=126.56,PseudoU_synth_1|PF01416.16|3.9e-11,PseudoU_synth_1|PF01416.16|4.1e-10 R_Transcript_35019:116-1840(+)
ATGGAAACCCAAAACCCAGATCTTCCCACTTCTCCGACCTCAACCGAACCCCTTGAGCCAGCCTCCAAAAAGCCCAAAATGTCAACCACAGCATCAGAAGACGAAGACACTCTCACTCTCACCACCACCACCAACTCATCAGACACCAATAATCCAAAACCAAAACGTTACAAAAGGCGTAAAGTTGCAATCTTTTTCGCATATTGTGGGGTAGGCTACCAAGGAATGCAAAAAAACCCAGGTGCCAAAACCATAGAAGGTGACTTTGAAGAAGCCCTATATCAAGCTGGTGCGGTACCTGATGAAGATCGTGGGTGTCCCAAACGCTTTGACTGGGCTCGTTCTGCTCGTACTGATAAGGGTGTTAGTGCTGTTGGTCAAGTTGTTTCTGGCCGTTTTTATGTGGACCCACCTGGTTTTGTTCAAAGACTTAATGCTAATCTTGCTACCCAGATCAGGGTTTTTGGTTTTAAGCGTGTTACACCTTCTTTTAATGCTAAGAAGTTCTGTGATAGGCGTAGGTATGTTTATTTGCTCCCTGTTTTTGCTCTTGATCCTAGCTGTCATCGTGATCGGGAGAGTGTTTTAGCTAGTTTAGGGTCTGGGAATGAGCTTGCTAAGTGTGTTGAATGCTCTGAGAGGGGCAGGAAAGTTGTTGGGTTGATGGGTAATAAGAGGGATTGGCATGAAAAAGGTGTTTTTAAAGGTTTTGTTCAGTCCGGCATTTCGTCGAACAGTGAGAGCGCATCTTTGAATATTATTGAGAAAGAGAGGGATCAAATGCACTGTGATGTTTCTTTGGATGGTAATGGTAATGGGGTGGTAAATAATGTGGTTGTTGAAGATTCTGAGGTTTTAGCTCAGTGTGGCATTTCGTCGAACAGTGAAGCTGCATTGTTATGTACTGAAGATGGTGAGAAGCAGAAAGAAGAGTGTGATGTTAATGTAGGGAATAATGGTGCTGCTGCTAATTTAGATGCTAATGCTGTTAATTCTGAATCGATGGTGGTGGACGAGGTATGTGAAGGAGATTCAAATGGGTGTGGCAATGGAGAGAAGGAGAAGGGGAAGGAAAGTAGTGATTTCAAGTATGGGAATGAAGAAAAAGAGAGGTTCAATAGAATACTAAAGTATTACGAGGGGACACATAACTTTCATAATTTCACCACTAGAACAAAGGCGGAAGATCCGTCTGCAAAACGATACATTGTGTCGTTTCAAGCAAACACTACGCTCACCGTTGAAGGGATTGAGTTTATCAAGTGTGAGGTTGTGGGACAAAGTTTCATGCTTCACCAGATTCGGAAAATGATGGGGCTTGCAGTAGCTATAATGAGGAATTTCGCTCCTGAATCAATTTTTGAGATAGCATTCAAACAGGATGTTCATATCAATGTGCCTACAGCCCCAGAGGTGGGCTTGTACTTGGACGAATGTCTCTTCACTTCGTATAACAATAAATGGAAAGCCTCGCATGAGGAACTATCCATGAAAGACTATGCTGAAGAGGCTGAAGAATTCAAATTGAAGCACATATACTCCCACATTGCTAAAACTGAGCACAAGGAAGCAGCTGTCGCAGTTTGGCTACACTCCTTAAACTACCGGAACTACCCTGATCTTCGGCCTCAACCTGTGGATTGTGATACAGGGGTCGCCATTGAGAGCAAGAGCACTGAAGCTGAGACGCTGGCTGAAGGTGATTCAACAACTGTGCCTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35019.p1 GENE.R_Transcript_35019~~R_Transcript_35019.p1 ORF type:complete len:575 (+),score=126.56,PseudoU_synth_1|PF01416.16|3.9e-11,PseudoU_synth_1|PF01416.16|4.1e-10 R_Transcript_35019:116-1840(+)
METQNPDLPTSPTSTEPLEPASKKPKMSTTASEDEDTLTLTTTTNSSDTNNPKPKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDFEEALYQAGAVPDEDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVQRLNANLATQIRVFGFKRVTPSFNAKKFCDRRRYVYLLPVFALDPSCHRDRESVLASLGSGNELAKCVECSERGRKVVGLMGNKRDWHEKGVFKGFVQSGISSNSESASLNIIEKERDQMHCDVSLDGNGNGVVNNVVVEDSEVLAQCGISSNSEAALLCTEDGEKQKEECDVNVGNNGAAANLDANAVNSESMVVDEVCEGDSNGCGNGEKEKGKESSDFKYGNEEKERFNRILKYYEGTHNFHNFTTRTKAEDPSAKRYIVSFQANTTLTVEGIEFIKCEVVGQSFMLHQIRKMMGLAVAIMRNFAPESIFEIAFKQDVHINVPTAPEVGLYLDECLFTSYNNKWKASHEELSMKDYAEEAEEFKLKHIYSHIAKTEHKEAAVAVWLHSLNYRNYPDLRPQPVDCDTGVAIESKSTEAETLAEGDSTTVPA*

Click here to download the sequence:
Link to NCBI Protein BLAST