Transcript Information: R_Transcript_35026.p1


Annotated TAIR IDAT1G20370.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7051846-7053588 | Reverse length=549
E-Value2.9E-186
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8613347568381
Replicate 23.9207751213681
Replicate 36.3163430020804
Condition 2: 8 Hour
Replicate 14.4442058542993
Replicate 24.9560767780638
Replicate 36.0188586699363
Condition 3: 24 Hour
Replicate 19.0148457700409
Replicate 27.3132621103136
Replicate 38.4418546872676


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35026.p1 GENE.R_Transcript_35026~~R_Transcript_35026.p1 ORF type:complete len:573 (+),score=121.87,PseudoU_synth_1|PF01416.16|3.8e-11,PseudoU_synth_1|PF01416.16|1.1e-10 R_Transcript_35026:116-1834(+)
ATGGAAACCCAAAACCCAGATCTTCCCACTTCTCCGACCTCAACCGAACCCCTTGAGCCAGCCTCCAAAAAGCCCAAAATGTCAACCACAGCATCAGAAGACGAAGACACTCTCACTCTCACCACCACCACCAACTCATCAGACACCAATAATCCAAAACCAAAACGTTACAAAAGGCGTAAAGTTGCAATCTTTTTCGCATATTGTGGGGTAGGCTACCAAGGAATGCAAAAAAACCCAGGTGCCAAAACCATAGAAGGTGACTTTGAAGAAGCCCTATATCAAGCTGGTGCGGTACCTGATGAAGATCGTGGGTGTCCCAAACGCTTTGACTGGGCTCGTTCTGCTCGTACTGATAAGGGTGTTAGTGCTGTTGGTCAAGTTGTTTCTGGCCGTTTTTATGTGGACCCACCTGGTTTTGTTCAAAGACTTAATGCTAATCTTGCTACCCAGATCAGGGTTTTTGGTTTTAAGCGTGTTACACCTTCTTTTAATGCTAAGAAGTTCTGTGATAGGCGTAGGTATGTTTATTTGCTCCCTGTTTTTGCTCTTGATCCTAGCTGTCATCGTGATCGGGAGAGTGTTTTAGCTAGTTTAGGGTCTGGGAATGAGCTTGCTAAGTGTGTTGAATGCTCTGAGAGGGGCAGGAAAGTTATTGGGTTGATGGTTAATAAGAGGGATTGGGATGAAAAAGGTGTTTTTCTTTTTCAGCCAGACATTTCTTCGAACAGTGAGAGTGCATCTTTCCATACTATTGAGAAAGGGAGGGATCAAATGCACTGTGATGTTTCTTTGGATGGTAATGATAATGGGGTGGGAAATAATGTGATTGTTGAAGGCTCTAAGGTTTTAGCTCAGTGTGGCATTTCGTCGAACAGTGAAGCTGCATTGTTAAGTACTGAAGATAGTGAGAAGCAGAAGGAAGAATGTGATGTTAATGTAGGGAATAATGGTGCTGCTGCTAATTTAGATGCTAATGCTGTTAATTCTGAATCGATGGTCGTGGACGAGGTGTGTGAAGGAGATTCAAATGGGTATGGCAATGGAGAGGAGGAGAAGGGGAAGGAAAGTAGTGATTTCAAGTATGGGAATGAAGAAAAAGAGAGGTTCAATAGAATACTAAAGTATTACGAGGGGACACATAACTTTCATAATTTCACCACTAGAACAAAGGCGGAAGATCCGTCTGCAAAACGATACATTGTGTCGTTTCAAGCAAACACTACGCTCACCGTTGAAGGGATTGAGTTTATCAAGTGTGAGGTTGTGGGACAAAGTTTCATGCTTCACCAGATTCGGAAAATGATGGGGCTTGCAGTAGCTATAATGAGGAATTTCGCTCCTGAATCAATCTTTGAGAGATCATTTGAACCGGATGTTCGTATCAATGTGCCTACAGCCCCAGAGGTGGGCTTGTACTTGGACGAATGTCTCTTCACTTCGTATAACAATAAATGGAAAGCCTCGCATGAGGAACTATCCATGAAAGACTATGCTGAAGAGGCGGAAGAATTCAAATTGAAGTACATATACTCCCACGTTGCTAAAACTGAGCACAAGGAAGCAGCTGTCGCAGTTTGGCTACACTCCTTAAACCACCGGAACTACCCTGATCTTCAGCCTCAACCTGTGGATGGTGATACAGGGGTCGCCATTGAGAGCAAGAGCACTGAAGCTGAGACGCTGGCTGAAGGTGATTCAACAACTGTGCCTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35026.p1 GENE.R_Transcript_35026~~R_Transcript_35026.p1 ORF type:complete len:573 (+),score=121.87,PseudoU_synth_1|PF01416.16|3.8e-11,PseudoU_synth_1|PF01416.16|1.1e-10 R_Transcript_35026:116-1834(+)
METQNPDLPTSPTSTEPLEPASKKPKMSTTASEDEDTLTLTTTTNSSDTNNPKPKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDFEEALYQAGAVPDEDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDPPGFVQRLNANLATQIRVFGFKRVTPSFNAKKFCDRRRYVYLLPVFALDPSCHRDRESVLASLGSGNELAKCVECSERGRKVIGLMVNKRDWDEKGVFLFQPDISSNSESASFHTIEKGRDQMHCDVSLDGNDNGVGNNVIVEGSKVLAQCGISSNSEAALLSTEDSEKQKEECDVNVGNNGAAANLDANAVNSESMVVDEVCEGDSNGYGNGEEEKGKESSDFKYGNEEKERFNRILKYYEGTHNFHNFTTRTKAEDPSAKRYIVSFQANTTLTVEGIEFIKCEVVGQSFMLHQIRKMMGLAVAIMRNFAPESIFERSFEPDVRINVPTAPEVGLYLDECLFTSYNNKWKASHEELSMKDYAEEAEEFKLKYIYSHVAKTEHKEAAVAVWLHSLNHRNYPDLQPQPVDGDTGVAIESKSTEAETLAEGDSTTVPA*

Click here to download the sequence:
Link to NCBI Protein BLAST