Transcript Information: R_Transcript_350713.p1


Annotated TAIR IDAT1G04880.1
Annotated Gene NameHMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1376106-1378264 | Reverse length=448
E-Value1.6E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32249047623178
Replicate 20.14838374852507
Replicate 30.1618850713509
Condition 2: 8 Hour
Replicate 10.259567472939
Replicate 20.079013716753306
Replicate 30
Condition 3: 24 Hour
Replicate 10.32449197494988
Replicate 20.15586755399701
Replicate 30.1546834253491


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_350713.p1 GENE.R_Transcript_350713~~R_Transcript_350713.p1 ORF type:5prime_partial len:283 (+),score=83.73,HMG_box|PF00505.15|4.6e-15,HMG_box_2|PF09011.6|3.2e-09 R_Transcript_350713:2-850(+)
AAGTTTGAAAGCGGTTATCTTGTTACTGTGACAATTGGCAAGGAGAAGCTGAAAGGGGTGCTCTATCAGCCTCCACCTGCTCCCATTAGTCAAGGGACGCAAACTTGTTTTGGTTTCTCGAGTGGCAAAACTGACAGCACTCCCACTACATCAGGTCTGCATCACAGGAGGAGGAGGAGGAAGAAATCCGAGATAAGAAAAAGGGATCCTGCTCACCCAAAGCCCAACAGAAGTGGGTACAATTTCTTCTTTGCTGAGCAACATTCCAGACTCAAACCACTGCATCCAGGGAAGGACCGTGAGATTAGTAGGATGATTGGTGAACTATGGAACAAATTGAAAGATAGTGAGAGATCTGTATATCAAGATAAAGCTATGAAGGATAAAGAAAGATACATGATGGAAATGGAGAGTTATCGAGAGAGATTGAAGGCTAATCAAGTCATAAGTGATGCAGTGCCTATACAGCAGAGGTTTCCTGGTTTGGATGTGAATATGGTGGAAGTCGATGTGAAAGATGGGACAGAAAGGGATTCCCCAGAAACTGAAGATGAAGATGAGAGTGGTTCTAGTAAGTGTGATTCTGATGAGGACGATGATCATATGGTAGATTCAGACAATGATGAATATCCAGCAGAAGGCGTTGGGGTCAAATCAGGCAACCTAGGTGCTTCTGAAACTACAACAGCTGAAGGGGGATTCCAGGTGGAGTTTGTCAAGGAAGACGAAAAAACTTGTGACGAAAGTGAAGGGAGCTTGGGAGCTGCTACTCATACTGCTGGGGAGAGGAAGCAAAGTTCACCACCTGAGGCGCAACATCTCAACTCTGTCCCTTTTACTATGTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_350713.p1 GENE.R_Transcript_350713~~R_Transcript_350713.p1 ORF type:5prime_partial len:283 (+),score=83.73,HMG_box|PF00505.15|4.6e-15,HMG_box_2|PF09011.6|3.2e-09 R_Transcript_350713:2-850(+)
KFESGYLVTVTIGKEKLKGVLYQPPPAPISQGTQTCFGFSSGKTDSTPTTSGLHHRRRRRKKSEIRKRDPAHPKPNRSGYNFFFAEQHSRLKPLHPGKDREISRMIGELWNKLKDSERSVYQDKAMKDKERYMMEMESYRERLKANQVISDAVPIQQRFPGLDVNMVEVDVKDGTERDSPETEDEDESGSSKCDSDEDDDHMVDSDNDEYPAEGVGVKSGNLGASETTTAEGGFQVEFVKEDEKTCDESEGSLGAATHTAGERKQSSPPEAQHLNSVPFTMS*

Click here to download the sequence:
Link to NCBI Protein BLAST