Transcript Information: R_Transcript_35080.p1


Annotated TAIR IDAT2G42610.1
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH10
Annotation TypeOrtholog
Chromosome Positionchr2:17748005-17748538 | Forward length=177
E-Value1.6E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9435409470071
Replicate 21.6848883050116
Replicate 33.1107915254034
Condition 2: 8 Hour
Replicate 13.62753554774
Replicate 21.1042410785771
Replicate 32.6891274993166
Condition 3: 24 Hour
Replicate 11.8422931725935
Replicate 21.4975793073849
Replicate 32.8372950520052


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_35080.p1 GENE.R_Transcript_35080~~R_Transcript_35080.p1 ORF type:3prime_partial len:162 (+),score=14.48,DUF640|PF04852.8|3.5e-60 R_Transcript_35080:27-509(+)
ATGCTTAGTTTGCCCCAAATAATGGAAGGCTCGTCCTCGCATAATTCACCCCCAACCCCAAACTATGAAGCCCACCACCACCTCCACCACCACAACCACCACCAAGCGCAGCCATCGACACCGACACCAACACCAAGTCGTTACGAGTCCCAAAAGAGGAGGGACTGGAACACTTTTGGGCAGTACCTGAAGAACCAACGGCCACCAGTGTCACTCTCCCAGTGCACAAGCCACCATGTGCTGGACTTCCTCAGGTACTTGGATCAGTTCGGAAAGACTAAGGTTCATGGTCTTGGGTGCATGTTTTACGGGCAACCGGAGCCACCGGCTCCGTGTTCTTGCCCCCTCCGGCAAGCCTGGGGCAGCCTTGACGCCCTCATCGGCCGCCTTCGGGCTGCCTACGAGGAGAACGGCGGTTCCCCGGAGATAAACCCCTTCGCCGGAAGCGCTATCCGGGTTTATCTGAGGGAGGTGAGGGAGTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_35080.p1 GENE.R_Transcript_35080~~R_Transcript_35080.p1 ORF type:3prime_partial len:162 (+),score=14.48,DUF640|PF04852.8|3.5e-60 R_Transcript_35080:27-509(+)
MLSLPQIMEGSSSHNSPPTPNYEAHHHLHHHNHHQAQPSTPTPTPSRYESQKRRDWNTFGQYLKNQRPPVSLSQCTSHHVLDFLRYLDQFGKTKVHGLGCMFYGQPEPPAPCSCPLRQAWGSLDALIGRLRAAYEENGGSPEINPFAGSAIRVYLREVREC

Click here to download the sequence:
Link to NCBI Protein BLAST