Transcript Information: R_Transcript_352021.p1


Annotated TAIR IDAT1G75850.1
Annotated Gene NameVPS35 Homolog B
Annotated Gene Symbol(s)VPS35B
Annotation TypeOrtholog
Chromosome Positionchr1:28478053-28483874 | Reverse length=790
E-Value4.4E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78676555839305
Replicate 20.36200517959135
Replicate 30.3949437516578
Condition 2: 8 Hour
Replicate 10.42217008529733
Replicate 20.57829866830652
Replicate 30.62591760759955
Condition 3: 24 Hour
Replicate 10.19791213127331
Replicate 20.3802630843203
Replicate 30.37737421873961


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_352021.p1 GENE.R_Transcript_352021~~R_Transcript_352021.p1 ORF type:5prime_partial len:116 (+),score=13.12,Vps35|PF03635.13|6.9e-06 R_Transcript_352021:3-350(+)
CGACTTATCCAAATGCTTGACAGTGATGAACCGGAAGAGATGTTCAAGATCATAACTGTTGTGCAGAAGCACATACTGGCAGGTGGTGTGAAGCGTTTACCCTTCACGGTCCCGCCCCTTGTTTTTACCTCTCTTAAGGTACTGTTCTTCCCTCAATTGTTTAGTTCCTCTTTTCTATCTTTCTATTCATGTTGGTACAGAAAAGGTAACTCAATATCCTCCCAAGTTATCCCTGATGACTTTAGTTACACTAGCTTGCTGAGCCTGAAGAAGAGTGTATGGCTGAATGAAGAACAAAGGCTGTTGACGAAGAAACTTATGCTGGATTCTTGTTGGACAACATCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_352021.p1 GENE.R_Transcript_352021~~R_Transcript_352021.p1 ORF type:5prime_partial len:116 (+),score=13.12,Vps35|PF03635.13|6.9e-06 R_Transcript_352021:3-350(+)
RLIQMLDSDEPEEMFKIITVVQKHILAGGVKRLPFTVPPLVFTSLKVLFFPQLFSSSFLSFYSCWYRKGNSISSQVIPDDFSYTSLLSLKKSVWLNEEQRLLTKKLMLDSCWTTS*

Click here to download the sequence:
Link to NCBI Protein BLAST