Transcript Information: R_Transcript_352032.p1


Annotated TAIR IDAT5G56310.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22802322-22803914 | Forward length=530
E-Value4E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.78071443528546
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.23535166329997


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_352032.p1 GENE.R_Transcript_352032~~R_Transcript_352032.p1 ORF type:internal len:93 (+),score=23.03,PPR|PF01535.16|0.00056,PPR|PF01535.16|0.77,PPR|PF01535.16|4.2e+03,PPR_2|PF13041.2|4.4,PPR_2|PF13041.2|0.0041,PPR_2|PF13041.2|2.9,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|2.6e+03 R_Transcript_352032:2-277(+)
TTAAAACAAGGAATACACCCAAATGAAGCTACCTTTGTTGGAATATTGTCTGCCTGTGGACGTGCTGGCTTAGTGGAGGAGGGTTTGCAAATTTTCCACTCAATGAATAGCTGCTATGGTATAACTCCAAATATAGAGCACCATGTTTGTGTTGTGGATCTCCTTGGCCGAGCAGATCATCTGCAAGAAGCTGAACAGTTCATCAGAGACATGCAGATGGAGGTTGATGCTGTTGTTTGGGGAGCTTTACTTAGTGCTTCTTGGTTTTGGATGAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_352032.p1 GENE.R_Transcript_352032~~R_Transcript_352032.p1 ORF type:internal len:93 (+),score=23.03,PPR|PF01535.16|0.00056,PPR|PF01535.16|0.77,PPR|PF01535.16|4.2e+03,PPR_2|PF13041.2|4.4,PPR_2|PF13041.2|0.0041,PPR_2|PF13041.2|2.9,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|2.6e+03 R_Transcript_352032:2-277(+)
LKQGIHPNEATFVGILSACGRAGLVEEGLQIFHSMNSCYGITPNIEHHVCVVDLLGRADHLQEAEQFIRDMQMEVDAVVWGALLSASWFWMN

Click here to download the sequence:
Link to NCBI Protein BLAST