Transcript Information: R_Transcript_352173.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12088053612397
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.43818395146842
Replicate 30.28990337333639


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_352173.p1 GENE.R_Transcript_352173~~R_Transcript_352173.p1 ORF type:5prime_partial len:151 (+),score=12.78,gag_pre-integrs|PF13976.2|1.7e-15,rve|PF00665.22|3.9e-10 R_Transcript_352173:2-454(+)
GACACTAATCAAACATATCTTTGGCACTGTCGTCTAGGCCATATAAATGAGAAACGCATTCAAAAGCTCCACAAAGGTGGGCTTCTTGATTCATTTGACTTTGAGTCATTTGAACTATGCGAAGCTTGTTTAATGGGTAGGATGACCAAGTCACCTTTCATACGGAACGGTGAAAGAGAAAGTGACCTCTTGGATCTCATACATACCGATGTATGCGGACCCCTGAGCACCGAAGGTAGAGGTAGGTACAACTACTTCATTTCTTTTACTGACGATTTAAATGGATATGGATGTGTCTACATAATGAGGCAAAAGTCGCAAGCATTTAAGAAGTTCAAAGAATTCCAAAATGAAGTTGAGAACCAACTTGGCAAGAAAATAAAAGCCCTTAGATCTGATCGAGGTGGTGAATATTTGAGTCAAGAGTTTGATGATCATCTCATAGATTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_352173.p1 GENE.R_Transcript_352173~~R_Transcript_352173.p1 ORF type:5prime_partial len:151 (+),score=12.78,gag_pre-integrs|PF13976.2|1.7e-15,rve|PF00665.22|3.9e-10 R_Transcript_352173:2-454(+)
DTNQTYLWHCRLGHINEKRIQKLHKGGLLDSFDFESFELCEACLMGRMTKSPFIRNGERESDLLDLIHTDVCGPLSTEGRGRYNYFISFTDDLNGYGCVYIMRQKSQAFKKFKEFQNEVENQLGKKIKALRSDRGGEYLSQEFDDHLIDC*

Click here to download the sequence:
Link to NCBI Protein BLAST