Transcript Information: R_Transcript_352388.p1


Annotated TAIR IDAT2G03880.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)REME1
Annotation TypeOrtholog
Chromosome Positionchr2:1181560-1183452 | Forward length=630
E-Value3.7E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36874668595391
Replicate 20.10604192129444
Replicate 30.23138118783992
Condition 2: 8 Hour
Replicate 10
Replicate 20.22586749334531
Replicate 30.18334960222613
Condition 3: 24 Hour
Replicate 10.46379408540816
Replicate 20.11139019641706
Replicate 30.44217585226055


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_352388.p1 GENE.R_Transcript_352388~~R_Transcript_352388.p1 ORF type:5prime_partial len:198 (+),score=48.91,PPR|PF01535.16|0.0091,PPR|PF01535.16|6.1e-09,PPR|PF01535.16|5.1e-06,PPR|PF01535.16|4.2e-08,PPR|PF01535.16|1.2e+03,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|5.1e-08,PPR_2|PF13041.2|6.9e-05,PPR_2|PF13041.2|2.9e-09,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|3.5e-05,PPR_1|PF12854.3|1.4e-06,PPR_3|PF13812.2|6.8,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|0.00054,PPR_3|PF13812.2|0.0036 R_Transcript_352388:2-595(+)
TTTAAGTATGGTTTGGATTCTGATGTTTTTGTAAGGAGTTCTTTGATTGATGTGTATGCAAAGTGGGGTGAGTTGGGTAATGCACTGGCTGTTTTTAATGAGTTTGTGACTGGGGATTTGGTTGTTTGGAATTCTATAATTGGGGCTTTTGCACAGAACAGTGATGGTGATGAGGCGTTGAGTCTGTTCAAGAGGATGAAGAGGGCTGGTTTCCCAGCTGAGCAAGCAACACTGACGAGCACGCTGAGAGCTGTTACTGGCCTAGCTTTGTTGGAATTGGGAAGGCAAATTCATGTCCATGAGTTGAAGTATCCTAAGGATTTGATTCTTAACAATGCACTTCTCGATATGTATTGCAAGTGCGGTAGCTTGGATGATGCGCGCTTGGTTTTTAAGCAAATGGTGGAAAGAGATGTCATATCTTGGAGTACCATGATTGCAGGGTTGGCTCAAAATGGGTTCAGTAGAGAAGCCCTAGCCTTGTTTGAGAAGATGAAACTATCAGGGACTAAGCCAAATTATATCACAATTGTTGGTGTTCTATTTGCTTGTAGCCATGGTGGTCTGTTAGAGGAGGGGTGGTGCTATTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_352388.p1 GENE.R_Transcript_352388~~R_Transcript_352388.p1 ORF type:5prime_partial len:198 (+),score=48.91,PPR|PF01535.16|0.0091,PPR|PF01535.16|6.1e-09,PPR|PF01535.16|5.1e-06,PPR|PF01535.16|4.2e-08,PPR|PF01535.16|1.2e+03,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|5.1e-08,PPR_2|PF13041.2|6.9e-05,PPR_2|PF13041.2|2.9e-09,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|3.5e-05,PPR_1|PF12854.3|1.4e-06,PPR_3|PF13812.2|6.8,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|0.00054,PPR_3|PF13812.2|0.0036 R_Transcript_352388:2-595(+)
FKYGLDSDVFVRSSLIDVYAKWGELGNALAVFNEFVTGDLVVWNSIIGAFAQNSDGDEALSLFKRMKRAGFPAEQATLTSTLRAVTGLALLELGRQIHVHELKYPKDLILNNALLDMYCKCGSLDDARLVFKQMVERDVISWSTMIAGLAQNGFSREALALFEKMKLSGTKPNYITIVGVLFACSHGGLLEEGWCYF*

Click here to download the sequence:
Link to NCBI Protein BLAST