Transcript Information: R_Transcript_352626.p1


Annotated TAIR IDAT5G66420.2
Annotated Gene NameLOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 1232 Blast hits to 1230 proteins in 311 species: Archae - 18; Bacteria - 959; Metazoa - 1; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26521893-26524986 | Reverse length=754
E-Value2.3E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.24651827135
Replicate 22.4226500480344
Replicate 32.2906737596152
Condition 2: 8 Hour
Replicate 11.6951752655785
Replicate 21.5480610505436
Replicate 32.7925554800595
Condition 3: 24 Hour
Replicate 14.4149629284046
Replicate 22.3751817266776
Replicate 33.3673391825996


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_352626.p1 GENE.R_Transcript_352626~~R_Transcript_352626.p1 ORF type:internal len:130 (-),score=24.75,PEP_hydrolase|PF09370.6|9.6e-59 R_Transcript_352626:3-389(-)
GAAATTGGATTTGCTGGTGTGCAGAACTTTCCAACTGTTGGCCTCTTTGATGGTAATTTTAGGAAGAATCTCGAAGAAACAGGAATGGGATATGGATTAGAGATTGAGATGATTCATAAAGCCTATAAGATGGGATTCTTAACAACTCCATATGCTTTCAACGAAGATGAAGCCATAGGGATGGCAAAGGCTGGGGCTCACATTATAGTAGCACACATGGGACTTACAACTTCTGGGTCTATCGGTGCAACAACCTCCATTTCACTGGAAGAGTGTGTAGATCGTGTTCAAGCTATTGCAGATGCCGCACATAGGATCAGACCAGATGTTATTGTGCTCTGCCATGGAGGCCCCATCTCCGGACCTGAGGAGGCCGAATTCATTCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_352626.p1 GENE.R_Transcript_352626~~R_Transcript_352626.p1 ORF type:internal len:130 (-),score=24.75,PEP_hydrolase|PF09370.6|9.6e-59 R_Transcript_352626:3-389(-)
EIGFAGVQNFPTVGLFDGNFRKNLEETGMGYGLEIEMIHKAYKMGFLTTPYAFNEDEAIGMAKAGAHIIVAHMGLTTSGSIGATTSISLEECVDRVQAIADAAHRIRPDVIVLCHGGPISGPEEAEFIL

Click here to download the sequence:
Link to NCBI Protein BLAST