Transcript Information: R_Transcript_352907.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeOrtholog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value1.2E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17550923994922
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.15696067273875
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_352907.p1 GENE.R_Transcript_352907~~R_Transcript_352907.p1 ORF type:internal len:312 (+),score=26.42,RPE65|PF03055.11|1.3e-50 R_Transcript_352907:3-935(+)
CCAAACACTCCAAAACACAAACCTTCTCCTGCTTCAAGACGCCAAGCCAAAAATGATATGTCAACAAGGAGGTTCAAAACTCCAGCACCAGTAGCTCTACCCAAACCTTCGTTTCAATCAACAATTTTAAACATATTAGATGATGTGATCAATAAGTTTGTGGATCCTCCAACACGGCAATCAGTAGATCCAAGATTTGTCCTCTCGGGAAACTTCGCTCCTGTGGAGGAGTGTCCTCCTACGGACTGTAAGGTCGTCGAGGGCGCCCTGCCCTCGTGCCTTGATGGGGCCTACATTCGCAATGGCCCTAATCCGCAGTTCTTCCCTAGTCGGCCCCACCACCTCTTTGATGGTGACGGCATGTTGCATAGCATCCGAATATCAAATGGCAAGGCCACGCTTTGTAGTCGCTTTGTCAAGACATACAAGTACATGGTAGAACATGAAGCGGGAACCAGTCTTCTTCCAAACATCTTTGCTGGGGTCAATAGCCTGCCGGGGTTTCTGGCTCGGTTAACTCTTGCAATTGCAAGAATTGCGTCCGGACACTATCACTTGAGTGATGGTCATGGGTTAGCCAACACTAGCTTGGCCTTGTTTGGCAATCGGCTATACGCCTTATGGGAATCCGACCTTCCATATGAAGTAAGATTGACTCCAAATGGGGATATCCAAACCATGGGTCGCTCTGATTTTGATGGCAAACTCTTGATGGGAATGACGGCTCATCCTAAGATTGATTCCGAGACAGGGGAGGCATTTGCCTTCCGTAGTAGCCACGTTTCTCCGTTTCTCACCTTCTTTAAATTCGACTCAAGAGGGAATAAATACAAGGACGTCCCAATCTTCTCCATGCTTCAACCCTCATTCATACATGACTTTGCTATCACCAAGAAGTACGCCATTTTCGCTGACATCCAACTTCGATTGGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_352907.p1 GENE.R_Transcript_352907~~R_Transcript_352907.p1 ORF type:internal len:312 (+),score=26.42,RPE65|PF03055.11|1.3e-50 R_Transcript_352907:3-935(+)
PNTPKHKPSPASRRQAKNDMSTRRFKTPAPVALPKPSFQSTILNILDDVINKFVDPPTRQSVDPRFVLSGNFAPVEECPPTDCKVVEGALPSCLDGAYIRNGPNPQFFPSRPHHLFDGDGMLHSIRISNGKATLCSRFVKTYKYMVEHEAGTSLLPNIFAGVNSLPGFLARLTLAIARIASGHYHLSDGHGLANTSLALFGNRLYALWESDLPYEVRLTPNGDIQTMGRSDFDGKLLMGMTAHPKIDSETGEAFAFRSSHVSPFLTFFKFDSRGNKYKDVPIFSMLQPSFIHDFAITKKYAIFADIQLRLD

Click here to download the sequence:
Link to NCBI Protein BLAST