Transcript Information: R_Transcript_352914.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15210800795599
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.30252684367312
Condition 3: 24 Hour
Replicate 10
Replicate 20.18379382408814
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_352914.p1 GENE.R_Transcript_352914~~R_Transcript_352914.p1 ORF type:5prime_partial len:120 (+),score=11.54,zf-RVT|PF13966.2|1.2e-19,zf-RVT|PF13966.2|1.6e+04 R_Transcript_352914:2-361(+)
AGGAGGCTAAAGATCAGTAGTATCTATGACTGGTTCTTAAAATCTCCTCAAGGCAACCACTGTACAAAAACAATTTGGGAGCCTGCAGGGATCCCTAAACATCAGATAATTACATGGATGGCAGTCAAGCAAGCTCTCCCAACTATTGATAAGCTGAGTTCCAGAGGGATGCCACTGGTGAACAGATGTGAGCTCTGCTGTATTGCCGCTGAATCCCACCACCATCTATTCTTCCAGTGTCCATATGCCCGAGAAGTTTGGCAATCAATCCTTGTATGGACAGGGCGCACTAGAAGAGGATGGAGTTTATGGCATGAGATGAGATGGCATTATAAGAACAACAAAGGTAAAAGATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_352914.p1 GENE.R_Transcript_352914~~R_Transcript_352914.p1 ORF type:5prime_partial len:120 (+),score=11.54,zf-RVT|PF13966.2|1.2e-19,zf-RVT|PF13966.2|1.6e+04 R_Transcript_352914:2-361(+)
RRLKISSIYDWFLKSPQGNHCTKTIWEPAGIPKHQIITWMAVKQALPTIDKLSSRGMPLVNRCELCCIAAESHHHLFFQCPYAREVWQSILVWTGRTRRGWSLWHEMRWHYKNNKGKRW*

Click here to download the sequence:
Link to NCBI Protein BLAST