Transcript Information: R_Transcript_353084.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.18341471870596
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_353084.p2 GENE.R_Transcript_353084~~R_Transcript_353084.p2 ORF type:complete len:267 (-),score=15.10,RVT_1|PF00078.23|3.4e-29 R_Transcript_353084:1101-1901(-)
ATGAAGAAGAAATCAAGAGCTCAGAAGGGAATGATGGCCCTCAAACTTGACATGAGCAAAGCCTATGACCGCGTAGAGTGGGACTTCCTAAGAGCCCTCCTTCTCCGAATGGGCTTTGACACAAAATGGGTCAATTTAGTAATGCTTTGTGTGTCCTCAGTTTCTTACTCCTTTTTGGTTAACGGGCAACCAAGTGAGATCCTCTTCCCATCAAGAGGACTTCGGCAAGGTGACCCGATCTCACCTTACTTATTTATCTTAGTGGCAGATGCTCTCTCGGGCCTCATCAATCTCGCAATAAGAGAAAGGAGAATACATGGAGCAAAAGCAAGCAAGAGGGGACCAGAAATCTCACACCTTTTCTTTGCAGATGACAGCTTACTCTTCACAAGAGCAAACCGACGGGAATGCGAAGAAATTATTGGTATCCTAAACCAATACGAAAAAGAATCCGGGCAGAAAATCAACTATGAAAAGTCGGAAGTGTCATTCAGCAGAGGAGTGGGAGATCATTCAATTCGAGATATAATGGGATGCCTCCATATGAAGAGAGTGGAAAAACATGATAAATATTTGGGACTTCCAATGTATTGCGGGAGGTCGAAAAAAGAGATATTCAAAGGAGTTAAAGACAGAATTTGGAAGAAAGTACAGGGGTGGAAGGAAAAGATGCTCTCACGAGCGGGCAAGGAAATCCTTTTAAAATCAGTTATCCAAGCTATGCCAACATACCTCATGGGTATCTACAAATTTCCACAGGGCTTAATAGACAAGATTCACTCCCTAATGGCTAGGTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_353084.p2 GENE.R_Transcript_353084~~R_Transcript_353084.p2 ORF type:complete len:267 (-),score=15.10,RVT_1|PF00078.23|3.4e-29 R_Transcript_353084:1101-1901(-)
MKKKSRAQKGMMALKLDMSKAYDRVEWDFLRALLLRMGFDTKWVNLVMLCVSSVSYSFLVNGQPSEILFPSRGLRQGDPISPYLFILVADALSGLINLAIRERRIHGAKASKRGPEISHLFFADDSLLFTRANRRECEEIIGILNQYEKESGQKINYEKSEVSFSRGVGDHSIRDIMGCLHMKRVEKHDKYLGLPMYCGRSKKEIFKGVKDRIWKKVQGWKEKMLSRAGKEILLKSVIQAMPTYLMGIYKFPQGLIDKIHSLMARF*

Click here to download the sequence:
Link to NCBI Protein BLAST