Transcript Information: R_Transcript_353573.p1


Annotated TAIR IDAT1G05310.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1550615-1552434 | Reverse length=393
E-Value1E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49332326904645
Replicate 20.063051953202096
Replicate 30.48152301253173
Condition 2: 8 Hour
Replicate 10.29412450387081
Replicate 20
Replicate 30.054509341202363
Condition 3: 24 Hour
Replicate 10.06894236404716
Replicate 20
Replicate 30.19718652871079


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_353573.p1 GENE.R_Transcript_353573~~R_Transcript_353573.p1 ORF type:5prime_partial len:333 (+),score=35.49,Pectinesterase|PF01095.15|7.5e-71 R_Transcript_353573:1-999(+)
GAAGATTTTCCCCCAGATTTTCCTCCTCCAAATACTAACAGTACGTCAATCTTGTGTGTAGATAGAAATGGGTGTTGTAACTTCACTACAGTGCAATCCGCAGTTGATGCTGCTCCCGTTCTTAGCCAGAAAAGAATTGTTATATGGATTAACTCCGGTGTTTACTATGAAAAGGTGATGGTCCCAAGAAGCAAACCAAACATAACGTTTCAAGGCCAAGACTATGCATCAACTGCCATCGTGTGGAATGATACAGCTAACTCTTCCCATGGCACCTTCAACAGTGGCTCGGTTCAAGTTTTTGGTTCCAACTTCATTGCTAAAAATATTAGTTTTATGAATGTAGCTCCAATTGCTAGCCCTGGCGATGTTGGAGCACAAGCAGTGGCGATTAGAATAGGAGGAGATGAGGCTGCCTTCTGGGGCTGCGGCTTCTTTGGTGCTCAAGATACGCTTCACGATGACAGGGGTCGTCATTACTTTAGAGATTGCTACATCCAAGGTTCTATTGACTTCATTTTCGGTAATGGAAGATCCTTCTATGAGAATTGCCAGTTGATATCCATAGCAAGCCCAGTTCCAAGAGGACAAAAATACATAAATGGAGTGGTCACAGCAAGTGGGAGATCTTCCCAGGATGAGAACAGTGGGTTTGTATTCTACAAGTCCACTATTGGAGGCACTGGAAGAATATGGTTGGGTCGTGCATGGCATCCATTTTCTCGTGTAATTTATGCTTACTCCACAATGTCGGACATTATTGCTCCCGAGGGGTGGAATGATTTCAATAATCCAAATAACGACCAGACCATTTTCTACGGGGAATATATGTGCTCTGGACCAGGTGCAAATACGACAACAAGGGTGGCTTATGAGCAAAGGCTTAACGATACTCTTGTCGCTCCTTTCCTAAACCTTTCATTCATTGATGCGGATCAATGGCTTGAGCCTTACAAAACTAATCTTGTTTCTCTCTCCACTAAAATTAAATCATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_353573.p1 GENE.R_Transcript_353573~~R_Transcript_353573.p1 ORF type:5prime_partial len:333 (+),score=35.49,Pectinesterase|PF01095.15|7.5e-71 R_Transcript_353573:1-999(+)
EDFPPDFPPPNTNSTSILCVDRNGCCNFTTVQSAVDAAPVLSQKRIVIWINSGVYYEKVMVPRSKPNITFQGQDYASTAIVWNDTANSSHGTFNSGSVQVFGSNFIAKNISFMNVAPIASPGDVGAQAVAIRIGGDEAAFWGCGFFGAQDTLHDDRGRHYFRDCYIQGSIDFIFGNGRSFYENCQLISIASPVPRGQKYINGVVTASGRSSQDENSGFVFYKSTIGGTGRIWLGRAWHPFSRVIYAYSTMSDIIAPEGWNDFNNPNNDQTIFYGEYMCSGPGANTTTRVAYEQRLNDTLVAPFLNLSFIDADQWLEPYKTNLVSLSTKIKSF*

Click here to download the sequence:
Link to NCBI Protein BLAST