Transcript Information: R_Transcript_353611.p1


Annotated TAIR IDAT2G45040.1
Annotated Gene NameMatrixin family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18577693-18578721 | Forward length=342
E-Value6E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20113455597486
Replicate 20.28920523989391
Replicate 30.063103960319979
Condition 2: 8 Hour
Replicate 10.26981669363356
Replicate 20.12320045091562
Replicate 30.55004880667839
Condition 3: 24 Hour
Replicate 10.25297859204082
Replicate 20.12151657790952
Replicate 30.42207694988507


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_353611.p1 GENE.R_Transcript_353611~~R_Transcript_353611.p1 ORF type:5prime_partial len:363 (+),score=41.27,Peptidase_M10|PF00413.20|1.8e-44,PG_binding_1|PF01471.14|2.7e-10 R_Transcript_353611:2-1090(+)
CTATTCAAACACTCGCTCAAACAACAAGCCAATATGTTCTCATTTCTTATCCACTCCTTACCTTTCTTGCTCATTTTCTCACTTCTCTTCACCCCATTATCATCCACCAATAACAAGCTTCAATATTCATCACCTCACAAACATCCCCATGCATGGCATAAATTTAAGAAACTCATCCATGCAAAAAAAGGGATCCAAAATGAAGCCATTTCAGAGCTCAAAAGCTACTTCCATCATTTTGGTTATTATGATCACCATCTTCCCACCATGATGAACAACTTCACCAATGAGTTTGACGACCAATTGGAAGACGTTATCACTCGTTACCAAAAGAATTACAACTTACCTATCACCGGTAACCTTAACCCTAACACACTTTCTCTGATCATGTCTCCTAGGTGTGGCTTACCAGACCATCTTTCCACGTTGCATGGCACAAAACACTATCGATATTTTTTTGGACGACCTAGATGGAGTCGAAAAATACCTATTTCTCTTACATATGCATTTTCTCCTAACAACATGATTCAATACTTAAGCTTACAAGACATAAGAAGTGCATTCCAACGTGCAGTCTCTAAATGGGCACTAGTTGTCCCCGTCACCTTCATGGAAACATATGATTATAGCTTTGCCGACATCAAAATCGGGTTTTTCAGTGGTGATCATGGAGATGGAGATGCATTTGATGGAGTCCTAGGAGTTCTAGCCCATGCATTTGCTCCTGAAGATGGGAGATTCCATCTTGATTCAGCTGAAACGTGGGCCGTTGATTTTGATAGGGAGAAATCAAAGATGGCCGTTGATTTGGAATCTGTAGCTTTGCATGAGATAGGGCATTTACTAGGGTTGTCTCATAGTAATATTAAGGAGTCAGTTATGTATCCAAGTTTGAAACCTAGAGAAAAGAAGTTGAATTTGAGGTTTGATGATATTGTTGGAGTTCAAAATCTTTATGGCTCTAACCCTAACTTTACCATTGGATCTTTGTTGGAATCTGAGACATCTTCTTCATCGTCATCCGTTTATAGGATGGACAGGTCTTCAAGATTGATTCCCTTTTTGCTGATTATCCATTTTTGTCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_353611.p1 GENE.R_Transcript_353611~~R_Transcript_353611.p1 ORF type:5prime_partial len:363 (+),score=41.27,Peptidase_M10|PF00413.20|1.8e-44,PG_binding_1|PF01471.14|2.7e-10 R_Transcript_353611:2-1090(+)
LFKHSLKQQANMFSFLIHSLPFLLIFSLLFTPLSSTNNKLQYSSPHKHPHAWHKFKKLIHAKKGIQNEAISELKSYFHHFGYYDHHLPTMMNNFTNEFDDQLEDVITRYQKNYNLPITGNLNPNTLSLIMSPRCGLPDHLSTLHGTKHYRYFFGRPRWSRKIPISLTYAFSPNNMIQYLSLQDIRSAFQRAVSKWALVVPVTFMETYDYSFADIKIGFFSGDHGDGDAFDGVLGVLAHAFAPEDGRFHLDSAETWAVDFDREKSKMAVDLESVALHEIGHLLGLSHSNIKESVMYPSLKPREKKLNLRFDDIVGVQNLYGSNPNFTIGSLLESETSSSSSSVYRMDRSSRLIPFLLIIHFCL*

Click here to download the sequence:
Link to NCBI Protein BLAST